Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21475 and CA264_21480 are separated by 198 nucleotides CA264_21480 and CA264_21485 are separated by 577 nucleotides
CA264_21475: CA264_21475 - hypothetical protein, at 162,408 to 162,995
_21475
CA264_21480: CA264_21480 - hypothetical protein, at 163,194 to 163,901
_21480
CA264_21485: CA264_21485 - hypothetical protein, at 164,479 to 165,753
_21485
Position (kb) 163
164 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 162.283 kb on - strand at 162.283 kb on - strand at 162.323 kb on - strand at 162.364 kb on - strand at 162.474 kb on - strand, within CA264_21475 at 162.474 kb on - strand, within CA264_21475 at 162.514 kb on + strand, within CA264_21475 at 162.514 kb on + strand, within CA264_21475 at 162.529 kb on + strand, within CA264_21475 at 162.530 kb on - strand, within CA264_21475 at 162.533 kb on + strand, within CA264_21475 at 162.544 kb on + strand, within CA264_21475 at 162.545 kb on - strand, within CA264_21475 at 162.577 kb on + strand, within CA264_21475 at 162.578 kb on - strand, within CA264_21475 at 162.626 kb on - strand, within CA264_21475 at 162.637 kb on + strand, within CA264_21475 at 162.638 kb on - strand, within CA264_21475 at 162.638 kb on - strand, within CA264_21475 at 162.652 kb on + strand, within CA264_21475 at 162.652 kb on + strand, within CA264_21475 at 162.652 kb on + strand, within CA264_21475 at 162.652 kb on + strand, within CA264_21475 at 162.652 kb on + strand, within CA264_21475 at 162.653 kb on - strand, within CA264_21475 at 162.661 kb on + strand, within CA264_21475 at 162.662 kb on - strand, within CA264_21475 at 162.667 kb on + strand, within CA264_21475 at 162.667 kb on + strand, within CA264_21475 at 162.667 kb on + strand, within CA264_21475 at 162.672 kb on + strand, within CA264_21475 at 162.673 kb on - strand, within CA264_21475 at 162.711 kb on - strand, within CA264_21475 at 162.711 kb on - strand, within CA264_21475 at 162.714 kb on + strand, within CA264_21475 at 162.714 kb on + strand, within CA264_21475 at 162.714 kb on + strand, within CA264_21475 at 162.714 kb on + strand, within CA264_21475 at 162.715 kb on - strand, within CA264_21475 at 162.715 kb on - strand, within CA264_21475 at 162.715 kb on - strand, within CA264_21475 at 162.715 kb on - strand, within CA264_21475 at 162.742 kb on - strand, within CA264_21475 at 162.742 kb on - strand, within CA264_21475 at 162.755 kb on + strand, within CA264_21475 at 162.788 kb on - strand, within CA264_21475 at 162.796 kb on - strand, within CA264_21475 at 162.837 kb on - strand, within CA264_21475 at 162.841 kb on - strand, within CA264_21475 at 162.877 kb on + strand, within CA264_21475 at 162.882 kb on + strand, within CA264_21475 at 162.883 kb on - strand, within CA264_21475 at 162.883 kb on - strand, within CA264_21475 at 162.946 kb on - strand at 162.988 kb on + strand at 162.988 kb on + strand at 162.989 kb on - strand at 162.989 kb on - strand at 162.989 kb on - strand at 163.004 kb on + strand at 163.019 kb on + strand at 163.020 kb on - strand at 163.051 kb on + strand at 163.067 kb on - strand at 163.071 kb on + strand at 163.104 kb on - strand at 163.123 kb on + strand at 163.124 kb on - strand at 163.124 kb on - strand at 163.128 kb on - strand at 163.128 kb on - strand at 163.128 kb on - strand at 163.129 kb on + strand at 163.130 kb on - strand at 163.130 kb on - strand at 163.170 kb on - strand at 163.170 kb on - strand at 163.170 kb on - strand at 163.214 kb on - strand at 163.219 kb on + strand at 163.219 kb on + strand at 163.219 kb on + strand at 163.220 kb on - strand at 163.220 kb on - strand at 163.220 kb on - strand at 163.240 kb on + strand at 163.313 kb on - strand, within CA264_21480 at 163.493 kb on + strand, within CA264_21480 at 163.503 kb on - strand, within CA264_21480 at 163.602 kb on + strand, within CA264_21480 at 163.614 kb on - strand, within CA264_21480 at 163.617 kb on + strand, within CA264_21480 at 163.618 kb on - strand, within CA264_21480 at 163.618 kb on - strand, within CA264_21480 at 163.618 kb on - strand, within CA264_21480 at 163.702 kb on - strand, within CA264_21480 at 163.705 kb on + strand, within CA264_21480 at 163.706 kb on - strand, within CA264_21480 at 163.751 kb on + strand, within CA264_21480 at 163.787 kb on - strand, within CA264_21480 at 163.831 kb on - strand at 163.940 kb on + strand at 163.956 kb on + strand at 163.957 kb on - strand at 163.960 kb on + strand at 163.960 kb on + strand at 164.004 kb on - strand at 164.012 kb on + strand at 164.019 kb on + strand at 164.027 kb on - strand at 164.027 kb on - strand at 164.027 kb on - strand at 164.092 kb on - strand at 164.092 kb on - strand at 164.145 kb on - strand at 164.149 kb on - strand at 164.149 kb on - strand at 164.155 kb on + strand at 164.156 kb on - strand at 164.175 kb on - strand at 164.186 kb on - strand at 164.191 kb on - strand at 164.191 kb on - strand at 164.193 kb on + strand at 164.225 kb on - strand at 164.225 kb on - strand at 164.317 kb on - strand at 164.406 kb on + strand at 164.458 kb on + strand at 164.458 kb on + strand at 164.482 kb on + strand at 164.482 kb on + strand at 164.516 kb on + strand at 164.516 kb on + strand at 164.558 kb on - strand at 164.558 kb on - strand at 164.559 kb on + strand at 164.559 kb on + strand at 164.592 kb on - strand at 164.592 kb on - strand at 164.592 kb on - strand at 164.772 kb on - strand, within CA264_21485 at 164.834 kb on + strand, within CA264_21485 at 164.835 kb on - strand, within CA264_21485 at 164.876 kb on + strand, within CA264_21485
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 162,283 - -0.1 162,283 - -2.2 162,323 - +0.3 162,364 - -0.4 162,474 - CA264_21475 0.11 -0.1 162,474 - CA264_21475 0.11 +0.2 162,514 + CA264_21475 0.18 -2.9 162,514 + CA264_21475 0.18 +0.0 162,529 + CA264_21475 0.21 -1.5 162,530 - CA264_21475 0.21 -0.0 162,533 + CA264_21475 0.21 +0.5 162,544 + CA264_21475 0.23 -0.3 162,545 - CA264_21475 0.23 -0.2 162,577 + CA264_21475 0.29 -0.4 162,578 - CA264_21475 0.29 -0.5 162,626 - CA264_21475 0.37 -0.4 162,637 + CA264_21475 0.39 +0.1 162,638 - CA264_21475 0.39 +1.2 162,638 - CA264_21475 0.39 +1.0 162,652 + CA264_21475 0.41 +0.8 162,652 + CA264_21475 0.41 +0.3 162,652 + CA264_21475 0.41 -0.2 162,652 + CA264_21475 0.41 +0.1 162,652 + CA264_21475 0.41 +0.7 162,653 - CA264_21475 0.42 -0.3 162,661 + CA264_21475 0.43 -0.8 162,662 - CA264_21475 0.43 -0.5 162,667 + CA264_21475 0.44 -0.1 162,667 + CA264_21475 0.44 -1.8 162,667 + CA264_21475 0.44 -0.6 162,672 + CA264_21475 0.45 -1.8 162,673 - CA264_21475 0.45 -0.1 162,711 - CA264_21475 0.52 -0.3 162,711 - CA264_21475 0.52 -0.2 162,714 + CA264_21475 0.52 -0.7 162,714 + CA264_21475 0.52 -0.0 162,714 + CA264_21475 0.52 -1.3 162,714 + CA264_21475 0.52 +0.3 162,715 - CA264_21475 0.52 -0.1 162,715 - CA264_21475 0.52 +0.3 162,715 - CA264_21475 0.52 -0.1 162,715 - CA264_21475 0.52 -0.7 162,742 - CA264_21475 0.57 +0.1 162,742 - CA264_21475 0.57 -1.1 162,755 + CA264_21475 0.59 -2.7 162,788 - CA264_21475 0.65 +0.4 162,796 - CA264_21475 0.66 -0.9 162,837 - CA264_21475 0.73 -2.4 162,841 - CA264_21475 0.74 -1.2 162,877 + CA264_21475 0.80 +0.3 162,882 + CA264_21475 0.81 -1.5 162,883 - CA264_21475 0.81 +0.1 162,883 - CA264_21475 0.81 +0.2 162,946 - +1.3 162,988 + -0.7 162,988 + -0.1 162,989 - -1.2 162,989 - +0.2 162,989 - +0.9 163,004 + -0.3 163,019 + -2.1 163,020 - -0.4 163,051 + -0.7 163,067 - -0.9 163,071 + -0.3 163,104 - -0.2 163,123 + -1.4 163,124 - -1.7 163,124 - -0.4 163,128 - -0.2 163,128 - -0.4 163,128 - +0.6 163,129 + -2.5 163,130 - -0.6 163,130 - -0.6 163,170 - +0.5 163,170 - -0.6 163,170 - +0.2 163,214 - -0.5 163,219 + -1.0 163,219 + -0.4 163,219 + -0.7 163,220 - -0.5 163,220 - -1.5 163,220 - -0.1 163,240 + +0.2 163,313 - CA264_21480 0.17 -0.9 163,493 + CA264_21480 0.42 +1.3 163,503 - CA264_21480 0.44 -0.4 163,602 + CA264_21480 0.58 -0.1 163,614 - CA264_21480 0.59 -0.1 163,617 + CA264_21480 0.60 -0.7 163,618 - CA264_21480 0.60 -2.4 163,618 - CA264_21480 0.60 +1.1 163,618 - CA264_21480 0.60 -0.3 163,702 - CA264_21480 0.72 +0.8 163,705 + CA264_21480 0.72 -0.3 163,706 - CA264_21480 0.72 -2.0 163,751 + CA264_21480 0.79 -0.1 163,787 - CA264_21480 0.84 -1.0 163,831 - -1.1 163,940 + -0.1 163,956 + -1.0 163,957 - +0.6 163,960 + +1.4 163,960 + -1.4 164,004 - -0.8 164,012 + -1.4 164,019 + -1.5 164,027 - -0.1 164,027 - +2.2 164,027 - -0.3 164,092 - +0.2 164,092 - -0.0 164,145 - -0.2 164,149 - -0.1 164,149 - +0.1 164,155 + -1.1 164,156 - -1.6 164,175 - +0.3 164,186 - -0.1 164,191 - -0.8 164,191 - -1.5 164,193 + -2.8 164,225 - -0.1 164,225 - -0.4 164,317 - -0.0 164,406 + -0.1 164,458 + +0.2 164,458 + -0.5 164,482 + -0.6 164,482 + +0.6 164,516 + +0.7 164,516 + -0.2 164,558 - +0.4 164,558 - -0.9 164,559 + +0.3 164,559 + -0.1 164,592 - -0.2 164,592 - -0.4 164,592 - -0.7 164,772 - CA264_21485 0.23 -2.8 164,834 + CA264_21485 0.28 -0.4 164,835 - CA264_21485 0.28 -0.6 164,876 + CA264_21485 0.31 -1.6
Or see this region's nucleotide sequence