Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21455 and CA264_21460 are separated by 74 nucleotides CA264_21460 and CA264_21465 are separated by 148 nucleotides CA264_21465 and CA264_21470 are separated by 110 nucleotides
CA264_21455: CA264_21455 - hypothetical protein, at 157,551 to 158,864
_21455
CA264_21460: CA264_21460 - hypothetical protein, at 158,939 to 160,138
_21460
CA264_21465: CA264_21465 - hypothetical protein, at 160,287 to 160,754
_21465
CA264_21470: CA264_21470 - hypothetical protein, at 160,865 to 161,497
_21470
Position (kb) 158
159
160
161 Strain fitness (log2 ratio) -2
-1
0
1 at 157.940 kb on - strand, within CA264_21455 at 157.947 kb on - strand, within CA264_21455 at 158.027 kb on - strand, within CA264_21455 at 158.029 kb on - strand, within CA264_21455 at 158.151 kb on - strand, within CA264_21455 at 158.348 kb on - strand, within CA264_21455 at 158.362 kb on - strand, within CA264_21455 at 158.362 kb on - strand, within CA264_21455 at 159.039 kb on - strand at 159.039 kb on - strand at 159.041 kb on - strand at 159.041 kb on - strand at 159.050 kb on - strand at 159.227 kb on - strand, within CA264_21460 at 159.233 kb on - strand, within CA264_21460 at 159.239 kb on - strand, within CA264_21460 at 160.021 kb on - strand at 160.021 kb on - strand at 160.063 kb on - strand at 160.273 kb on - strand at 160.273 kb on - strand at 160.306 kb on - strand at 160.308 kb on - strand at 160.367 kb on - strand, within CA264_21465 at 160.503 kb on - strand, within CA264_21465 at 160.619 kb on - strand, within CA264_21465 at 160.709 kb on - strand at 160.908 kb on + strand at 160.965 kb on + strand, within CA264_21470 at 160.966 kb on - strand, within CA264_21470 at 161.085 kb on + strand, within CA264_21470 at 161.086 kb on - strand, within CA264_21470 at 161.086 kb on - strand, within CA264_21470 at 161.086 kb on - strand, within CA264_21470 at 161.093 kb on + strand, within CA264_21470 at 161.093 kb on + strand, within CA264_21470
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 157,940 - CA264_21455 0.30 +1.3 157,947 - CA264_21455 0.30 -0.7 158,027 - CA264_21455 0.36 +0.9 158,029 - CA264_21455 0.36 -0.1 158,151 - CA264_21455 0.46 -0.9 158,348 - CA264_21455 0.61 -1.1 158,362 - CA264_21455 0.62 -2.1 158,362 - CA264_21455 0.62 +0.1 159,039 - -0.7 159,039 - +0.1 159,041 - -1.0 159,041 - +1.3 159,050 - -1.2 159,227 - CA264_21460 0.24 +0.7 159,233 - CA264_21460 0.24 -0.5 159,239 - CA264_21460 0.25 +1.1 160,021 - -2.1 160,021 - -1.1 160,063 - +1.6 160,273 - +0.7 160,273 - +1.1 160,306 - -0.9 160,308 - +0.4 160,367 - CA264_21465 0.17 -0.1 160,503 - CA264_21465 0.46 -1.1 160,619 - CA264_21465 0.71 -1.1 160,709 - +0.7 160,908 + -0.2 160,965 + CA264_21470 0.16 +0.6 160,966 - CA264_21470 0.16 -0.7 161,085 + CA264_21470 0.35 -2.7 161,086 - CA264_21470 0.35 -0.6 161,086 - CA264_21470 0.35 +0.8 161,086 - CA264_21470 0.35 +0.6 161,093 + CA264_21470 0.36 -0.7 161,093 + CA264_21470 0.36 +0.6
Or see this region's nucleotide sequence