Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21120 and CA264_21125 are separated by 585 nucleotides CA264_21125 and CA264_21130 are separated by 410 nucleotides CA264_21130 and CA264_21135 are separated by 50 nucleotides
CA264_21120: CA264_21120 - ZIP family zinc transporter, at 89,964 to 90,704
_21120
CA264_21125: CA264_21125 - hypothetical protein, at 91,290 to 91,496
_21125
CA264_21130: CA264_21130 - hypothetical protein, at 91,907 to 92,332
_21130
CA264_21135: CA264_21135 - cation transporter, at 92,383 to 93,279
_21135
Position (kb)
91
92 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 90.320 kb on + strand, within CA264_21120 at 90.320 kb on + strand, within CA264_21120 at 90.321 kb on - strand, within CA264_21120 at 90.425 kb on + strand, within CA264_21120 at 90.586 kb on + strand, within CA264_21120 at 90.586 kb on + strand, within CA264_21120 at 90.587 kb on - strand, within CA264_21120 at 90.605 kb on - strand, within CA264_21120 at 90.674 kb on + strand at 90.679 kb on + strand at 90.680 kb on - strand at 90.680 kb on - strand at 90.680 kb on - strand at 90.702 kb on + strand at 90.710 kb on - strand at 90.743 kb on + strand at 90.829 kb on + strand at 90.866 kb on - strand at 90.907 kb on - strand at 90.939 kb on + strand at 90.939 kb on + strand at 90.940 kb on - strand at 90.940 kb on - strand at 90.941 kb on + strand at 90.941 kb on + strand at 90.941 kb on + strand at 90.942 kb on - strand at 91.010 kb on + strand at 91.016 kb on + strand at 91.028 kb on - strand at 91.028 kb on - strand at 91.092 kb on - strand at 91.130 kb on - strand at 91.132 kb on + strand at 91.133 kb on - strand at 91.133 kb on - strand at 91.180 kb on - strand at 91.180 kb on - strand at 91.180 kb on - strand at 91.184 kb on - strand at 91.210 kb on - strand at 91.221 kb on - strand at 91.221 kb on - strand at 91.223 kb on - strand at 91.253 kb on + strand at 91.254 kb on - strand at 91.258 kb on - strand at 91.259 kb on + strand at 91.332 kb on - strand, within CA264_21125 at 91.382 kb on + strand, within CA264_21125 at 91.436 kb on + strand, within CA264_21125 at 91.446 kb on - strand, within CA264_21125 at 91.457 kb on + strand, within CA264_21125 at 91.459 kb on + strand, within CA264_21125 at 91.460 kb on - strand, within CA264_21125 at 91.460 kb on - strand, within CA264_21125 at 91.522 kb on + strand at 91.525 kb on + strand at 91.525 kb on + strand at 91.558 kb on - strand at 91.558 kb on - strand at 91.591 kb on - strand at 91.592 kb on + strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.596 kb on + strand at 91.597 kb on - strand at 91.597 kb on - strand at 91.597 kb on - strand at 91.598 kb on + strand at 91.605 kb on + strand at 91.605 kb on + strand at 91.605 kb on + strand at 91.606 kb on - strand at 91.606 kb on - strand at 91.627 kb on + strand at 91.627 kb on + strand at 91.634 kb on - strand at 91.652 kb on - strand at 91.652 kb on - strand at 91.652 kb on - strand at 91.670 kb on - strand at 91.730 kb on + strand at 91.730 kb on + strand at 91.732 kb on + strand at 91.733 kb on - strand at 91.762 kb on + strand at 91.763 kb on - strand at 91.790 kb on + strand at 91.838 kb on - strand at 91.866 kb on - strand at 91.956 kb on + strand, within CA264_21130 at 91.956 kb on + strand, within CA264_21130 at 91.956 kb on + strand, within CA264_21130 at 91.957 kb on - strand, within CA264_21130 at 92.071 kb on + strand, within CA264_21130 at 92.185 kb on + strand, within CA264_21130 at 92.185 kb on + strand, within CA264_21130 at 92.185 kb on + strand, within CA264_21130 at 92.187 kb on + strand, within CA264_21130 at 92.188 kb on - strand, within CA264_21130 at 92.188 kb on - strand, within CA264_21130 at 92.188 kb on - strand, within CA264_21130 at 92.249 kb on + strand, within CA264_21130 at 92.251 kb on + strand, within CA264_21130 at 92.258 kb on + strand, within CA264_21130 at 92.259 kb on - strand, within CA264_21130 at 92.259 kb on - strand, within CA264_21130 at 92.259 kb on - strand, within CA264_21130 at 92.287 kb on + strand, within CA264_21130 at 92.287 kb on + strand, within CA264_21130 at 92.291 kb on + strand at 92.291 kb on + strand at 92.292 kb on - strand at 92.292 kb on - strand at 92.292 kb on - strand at 92.292 kb on - strand at 92.293 kb on + strand at 92.327 kb on + strand at 92.328 kb on - strand at 92.328 kb on - strand at 92.328 kb on - strand at 92.332 kb on + strand at 92.350 kb on + strand at 92.351 kb on - strand at 92.351 kb on - strand at 92.358 kb on + strand at 92.359 kb on - strand at 92.364 kb on + strand at 92.402 kb on + strand at 92.403 kb on - strand at 92.461 kb on + strand at 92.461 kb on + strand at 92.462 kb on - strand at 92.463 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 90,320 + CA264_21120 0.48 +1.3 90,320 + CA264_21120 0.48 -1.4 90,321 - CA264_21120 0.48 -0.4 90,425 + CA264_21120 0.62 -2.2 90,586 + CA264_21120 0.84 -1.6 90,586 + CA264_21120 0.84 -0.4 90,587 - CA264_21120 0.84 +1.3 90,605 - CA264_21120 0.87 -0.4 90,674 + -1.2 90,679 + -0.2 90,680 - +0.7 90,680 - +0.1 90,680 - +1.9 90,702 + +0.8 90,710 - -3.1 90,743 + +0.1 90,829 + -0.6 90,866 - +0.1 90,907 - -1.5 90,939 + -0.5 90,939 + -1.5 90,940 - -0.5 90,940 - +0.2 90,941 + +1.4 90,941 + +0.2 90,941 + -2.4 90,942 - +1.1 91,010 + -0.8 91,016 + -0.8 91,028 - +0.3 91,028 - -1.0 91,092 - -0.5 91,130 - +0.1 91,132 + +0.5 91,133 - -1.2 91,133 - +0.6 91,180 - +1.7 91,180 - +0.5 91,180 - -0.5 91,184 - +0.2 91,210 - -0.5 91,221 - +0.7 91,221 - -1.2 91,223 - -1.1 91,253 + -0.0 91,254 - +0.6 91,258 - +0.3 91,259 + -0.4 91,332 - CA264_21125 0.20 -1.2 91,382 + CA264_21125 0.44 -0.3 91,436 + CA264_21125 0.71 -0.3 91,446 - CA264_21125 0.75 -0.3 91,457 + CA264_21125 0.81 +0.1 91,459 + CA264_21125 0.82 -0.9 91,460 - CA264_21125 0.82 -0.8 91,460 - CA264_21125 0.82 -0.5 91,522 + +0.3 91,525 + +0.1 91,525 + +0.7 91,558 - +0.5 91,558 - +1.3 91,591 - +0.1 91,592 + -0.5 91,593 - +0.1 91,593 - -1.2 91,593 - +1.2 91,593 - -0.5 91,593 - -0.3 91,593 - -2.2 91,593 - -0.3 91,593 - +0.9 91,593 - +0.4 91,596 + +0.8 91,597 - +0.1 91,597 - +0.5 91,597 - -3.3 91,598 + +0.6 91,605 + +0.4 91,605 + -0.6 91,605 + -0.5 91,606 - -0.1 91,606 - +0.2 91,627 + -2.1 91,627 + +0.1 91,634 - +0.3 91,652 - -0.2 91,652 - +0.6 91,652 - -1.4 91,670 - -0.1 91,730 + -0.7 91,730 + -0.4 91,732 + -1.4 91,733 - +0.1 91,762 + +0.8 91,763 - -0.2 91,790 + +0.0 91,838 - -1.8 91,866 - +0.9 91,956 + CA264_21130 0.12 -0.1 91,956 + CA264_21130 0.12 -0.7 91,956 + CA264_21130 0.12 -0.8 91,957 - CA264_21130 0.12 +1.3 92,071 + CA264_21130 0.38 -1.1 92,185 + CA264_21130 0.65 +1.0 92,185 + CA264_21130 0.65 -1.8 92,185 + CA264_21130 0.65 -1.8 92,187 + CA264_21130 0.66 -0.5 92,188 - CA264_21130 0.66 +0.1 92,188 - CA264_21130 0.66 -1.0 92,188 - CA264_21130 0.66 +0.5 92,249 + CA264_21130 0.80 -0.8 92,251 + CA264_21130 0.81 +0.5 92,258 + CA264_21130 0.82 +0.5 92,259 - CA264_21130 0.83 +0.1 92,259 - CA264_21130 0.83 +0.1 92,259 - CA264_21130 0.83 -0.3 92,287 + CA264_21130 0.89 +0.5 92,287 + CA264_21130 0.89 +0.8 92,291 + +1.0 92,291 + -0.5 92,292 - -0.3 92,292 - -0.7 92,292 - -0.5 92,292 - -0.7 92,293 + +0.8 92,327 + +0.6 92,328 - -0.0 92,328 - +0.1 92,328 - +0.1 92,332 + -0.8 92,350 + -0.2 92,351 - -1.7 92,351 - -2.2 92,358 + +0.5 92,359 - -2.2 92,364 + -0.3 92,402 + +0.2 92,403 - -2.8 92,461 + +0.4 92,461 + +1.1 92,462 - -0.2 92,463 + +1.4
Or see this region's nucleotide sequence