Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18810 and CA264_18815 are separated by 23 nucleotides CA264_18815 and CA264_18820 are separated by 219 nucleotides CA264_18820 and CA264_18825 are separated by 201 nucleotides
CA264_18810: CA264_18810 - hypothetical protein, at 4,367,096 to 4,368,058
_18810
CA264_18815: CA264_18815 - DHH family phosphoesterase, at 4,368,082 to 4,369,104
_18815
CA264_18820: CA264_18820 - nucleoside-diphosphate kinase, at 4,369,324 to 4,369,743
_18820
CA264_18825: CA264_18825 - hypothetical protein, at 4,369,945 to 4,370,319
_18825
Position (kb)
4368
4369
4370 Strain fitness (log2 ratio)
-2
-1
0
1 at 4367.093 kb on + strand at 4367.094 kb on - strand at 4367.094 kb on - strand at 4367.141 kb on - strand at 4367.361 kb on + strand, within CA264_18810 at 4367.361 kb on + strand, within CA264_18810 at 4367.366 kb on + strand, within CA264_18810 at 4367.366 kb on + strand, within CA264_18810 at 4367.417 kb on + strand, within CA264_18810 at 4367.425 kb on - strand, within CA264_18810 at 4367.479 kb on - strand, within CA264_18810 at 4367.479 kb on - strand, within CA264_18810 at 4367.608 kb on + strand, within CA264_18810 at 4367.838 kb on + strand, within CA264_18810 at 4367.855 kb on + strand, within CA264_18810 at 4367.856 kb on - strand, within CA264_18810 at 4367.881 kb on + strand, within CA264_18810 at 4367.948 kb on - strand, within CA264_18810 at 4367.968 kb on + strand at 4367.973 kb on + strand at 4368.049 kb on + strand at 4368.049 kb on + strand at 4368.049 kb on + strand at 4368.060 kb on + strand at 4368.060 kb on + strand at 4368.060 kb on + strand at 4369.115 kb on + strand at 4369.131 kb on + strand at 4369.139 kb on + strand at 4369.140 kb on - strand at 4369.163 kb on + strand at 4369.202 kb on + strand at 4369.203 kb on - strand at 4369.232 kb on + strand at 4369.238 kb on - strand at 4369.238 kb on - strand at 4369.239 kb on + strand at 4369.255 kb on + strand at 4369.255 kb on + strand at 4369.255 kb on + strand at 4369.255 kb on + strand at 4369.255 kb on + strand at 4369.256 kb on - strand at 4369.256 kb on - strand at 4369.256 kb on - strand at 4369.256 kb on - strand at 4369.258 kb on - strand at 4369.258 kb on - strand at 4369.287 kb on + strand at 4369.299 kb on + strand at 4369.757 kb on + strand at 4369.782 kb on + strand at 4369.782 kb on + strand at 4369.783 kb on - strand at 4369.813 kb on + strand at 4369.831 kb on - strand at 4369.946 kb on + strand at 4369.946 kb on + strand at 4370.008 kb on - strand, within CA264_18825 at 4370.008 kb on - strand, within CA264_18825 at 4370.024 kb on + strand, within CA264_18825 at 4370.096 kb on - strand, within CA264_18825 at 4370.103 kb on - strand, within CA264_18825 at 4370.103 kb on - strand, within CA264_18825
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 4,367,093 + +0.1 4,367,094 - +0.5 4,367,094 - -0.6 4,367,141 - -0.4 4,367,361 + CA264_18810 0.28 +0.8 4,367,361 + CA264_18810 0.28 -0.2 4,367,366 + CA264_18810 0.28 +1.4 4,367,366 + CA264_18810 0.28 +0.7 4,367,417 + CA264_18810 0.33 +0.2 4,367,425 - CA264_18810 0.34 +0.8 4,367,479 - CA264_18810 0.40 -0.4 4,367,479 - CA264_18810 0.40 -0.6 4,367,608 + CA264_18810 0.53 -0.7 4,367,838 + CA264_18810 0.77 -0.1 4,367,855 + CA264_18810 0.79 -0.1 4,367,856 - CA264_18810 0.79 -1.4 4,367,881 + CA264_18810 0.82 +1.4 4,367,948 - CA264_18810 0.88 +0.3 4,367,968 + -0.2 4,367,973 + +0.0 4,368,049 + -0.8 4,368,049 + -0.1 4,368,049 + -0.2 4,368,060 + -0.1 4,368,060 + -1.8 4,368,060 + +0.5 4,369,115 + +0.4 4,369,131 + -1.4 4,369,139 + -0.9 4,369,140 - -0.4 4,369,163 + +1.6 4,369,202 + -0.3 4,369,203 - -1.8 4,369,232 + +0.0 4,369,238 - -1.1 4,369,238 - -1.4 4,369,239 + -2.5 4,369,255 + +0.1 4,369,255 + +0.5 4,369,255 + +0.8 4,369,255 + -1.1 4,369,255 + -0.2 4,369,256 - -0.6 4,369,256 - -1.1 4,369,256 - -1.8 4,369,256 - -0.7 4,369,258 - -1.3 4,369,258 - -0.8 4,369,287 + -0.2 4,369,299 + -0.0 4,369,757 + +0.5 4,369,782 + -0.1 4,369,782 + -0.7 4,369,783 - -1.0 4,369,813 + +0.6 4,369,831 - +0.6 4,369,946 + -0.1 4,369,946 + +0.9 4,370,008 - CA264_18825 0.17 +0.5 4,370,008 - CA264_18825 0.17 +1.7 4,370,024 + CA264_18825 0.21 -1.8 4,370,096 - CA264_18825 0.40 -0.7 4,370,103 - CA264_18825 0.42 +0.6 4,370,103 - CA264_18825 0.42 +1.6
Or see this region's nucleotide sequence