Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16150

Experiment: m.b. Vancomycin 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_16145 and CA264_16150 are separated by 4 nucleotidesCA264_16150 and CA264_16155 are separated by 249 nucleotides CA264_16145: CA264_16145 - copper transporter, at 3,758,672 to 3,762,079 _16145 CA264_16150: CA264_16150 - acyl carrier protein, at 3,762,084 to 3,762,341 _16150 CA264_16155: CA264_16155 - hypothetical protein, at 3,762,591 to 3,763,331 _16155 Position (kb) 3762 3763Strain fitness (log2 ratio) -2 -1 0 1 2at 3761.099 kb on - strand, within CA264_16145at 3761.123 kb on + strand, within CA264_16145at 3761.141 kb on + strand, within CA264_16145at 3761.161 kb on + strand, within CA264_16145at 3761.196 kb on - strand, within CA264_16145at 3761.271 kb on - strand, within CA264_16145at 3761.605 kb on + strand, within CA264_16145at 3761.686 kb on + strand, within CA264_16145at 3761.701 kb on - strand, within CA264_16145at 3761.832 kb on - strandat 3761.970 kb on - strandat 3762.056 kb on - strandat 3762.068 kb on + strandat 3762.069 kb on - strandat 3762.078 kb on - strandat 3762.084 kb on - strandat 3762.151 kb on + strand, within CA264_16150at 3762.339 kb on + strandat 3762.397 kb on + strandat 3762.538 kb on + strandat 3762.553 kb on + strandat 3762.555 kb on + strandat 3762.568 kb on + strandat 3762.568 kb on + strandat 3762.569 kb on - strandat 3762.569 kb on - strandat 3762.569 kb on - strandat 3762.575 kb on + strandat 3762.582 kb on - strandat 3762.728 kb on - strand, within CA264_16155at 3762.773 kb on + strand, within CA264_16155at 3762.865 kb on + strand, within CA264_16155at 3762.887 kb on - strand, within CA264_16155at 3762.987 kb on - strand, within CA264_16155at 3763.065 kb on - strand, within CA264_16155at 3763.158 kb on - strand, within CA264_16155at 3763.207 kb on - strand, within CA264_16155at 3763.232 kb on + strand, within CA264_16155at 3763.315 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml
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3,761,099 - CA264_16145 0.71 +1.7
3,761,123 + CA264_16145 0.72 +1.2
3,761,141 + CA264_16145 0.72 +0.9
3,761,161 + CA264_16145 0.73 +0.9
3,761,196 - CA264_16145 0.74 +1.1
3,761,271 - CA264_16145 0.76 +1.8
3,761,605 + CA264_16145 0.86 +0.4
3,761,686 + CA264_16145 0.88 -0.2
3,761,701 - CA264_16145 0.89 +2.0
3,761,832 - +2.2
3,761,970 - +0.4
3,762,056 - +0.9
3,762,068 + +1.8
3,762,069 - +1.0
3,762,078 - -0.2
3,762,084 - -1.7
3,762,151 + CA264_16150 0.26 -0.3
3,762,339 + -0.1
3,762,397 + -1.5
3,762,538 + -0.5
3,762,553 + +0.6
3,762,555 + -0.2
3,762,568 + +0.5
3,762,568 + -1.1
3,762,569 - -0.9
3,762,569 - +0.2
3,762,569 - -0.0
3,762,575 + +0.1
3,762,582 - +0.1
3,762,728 - CA264_16155 0.18 -1.2
3,762,773 + CA264_16155 0.25 -0.2
3,762,865 + CA264_16155 0.37 -0.1
3,762,887 - CA264_16155 0.40 -2.7
3,762,987 - CA264_16155 0.53 -1.5
3,763,065 - CA264_16155 0.64 +0.5
3,763,158 - CA264_16155 0.77 -0.5
3,763,207 - CA264_16155 0.83 -0.3
3,763,232 + CA264_16155 0.87 +0.3
3,763,315 - -0.7

Or see this region's nucleotide sequence