Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15420 and CA264_15425 are separated by 41 nucleotides CA264_15425 and CA264_15430 are separated by 438 nucleotides
CA264_15420: CA264_15420 - hypothetical protein, at 3,611,694 to 3,614,132
_15420
CA264_15425: CA264_15425 - DUF4834 domain-containing protein, at 3,614,174 to 3,614,452
_15425
CA264_15430: CA264_15430 - carbamoyl phosphate synthase large subunit, at 3,614,891 to 3,617,704
_15430
Position (kb)
3614
3615 Strain fitness (log2 ratio)
-2
-1
0
1 at 3614.132 kb on + strand at 3614.132 kb on + strand at 3614.132 kb on + strand at 3614.166 kb on + strand at 3614.181 kb on - strand at 3614.200 kb on - strand at 3614.328 kb on + strand, within CA264_15425 at 3614.384 kb on + strand, within CA264_15425 at 3614.404 kb on + strand, within CA264_15425 at 3614.435 kb on - strand at 3614.438 kb on + strand at 3614.480 kb on + strand at 3614.484 kb on + strand at 3614.484 kb on + strand at 3614.484 kb on + strand at 3614.486 kb on + strand at 3614.487 kb on - strand at 3614.515 kb on - strand at 3614.570 kb on + strand at 3614.577 kb on + strand at 3614.577 kb on + strand at 3614.652 kb on - strand at 3614.664 kb on + strand at 3614.669 kb on + strand at 3614.670 kb on - strand at 3614.670 kb on - strand at 3614.683 kb on + strand at 3614.683 kb on + strand at 3614.683 kb on + strand at 3614.683 kb on + strand at 3614.684 kb on - strand at 3614.684 kb on - strand at 3614.685 kb on + strand at 3614.692 kb on + strand at 3614.837 kb on + strand at 3614.838 kb on - strand at 3614.878 kb on - strand at 3614.883 kb on + strand at 3614.885 kb on + strand at 3614.886 kb on - strand at 3614.886 kb on - strand at 3614.886 kb on - strand at 3614.892 kb on + strand at 3614.893 kb on - strand at 3614.938 kb on - strand at 3614.959 kb on + strand at 3615.031 kb on - strand at 3615.067 kb on + strand at 3615.067 kb on + strand at 3615.067 kb on + strand at 3615.067 kb on + strand at 3615.068 kb on - strand at 3615.082 kb on + strand at 3615.082 kb on + strand at 3615.083 kb on - strand at 3615.127 kb on - strand at 3615.135 kb on + strand at 3615.136 kb on - strand at 3615.148 kb on - strand at 3615.172 kb on + strand at 3615.173 kb on - strand, within CA264_15430 at 3615.205 kb on - strand, within CA264_15430 at 3615.339 kb on + strand, within CA264_15430 at 3615.397 kb on - strand, within CA264_15430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 3,614,132 + -1.3 3,614,132 + +0.0 3,614,132 + -2.1 3,614,166 + -0.8 3,614,181 - -0.1 3,614,200 - -1.0 3,614,328 + CA264_15425 0.55 +1.2 3,614,384 + CA264_15425 0.75 +0.6 3,614,404 + CA264_15425 0.82 -0.4 3,614,435 - +0.9 3,614,438 + -0.4 3,614,480 + -0.6 3,614,484 + +0.8 3,614,484 + -0.5 3,614,484 + -0.0 3,614,486 + -0.9 3,614,487 - -1.6 3,614,515 - -1.3 3,614,570 + -0.6 3,614,577 + -0.4 3,614,577 + -0.6 3,614,652 - -1.5 3,614,664 + +0.4 3,614,669 + -0.1 3,614,670 - +0.7 3,614,670 - +0.3 3,614,683 + -1.0 3,614,683 + +0.1 3,614,683 + -0.9 3,614,683 + +0.7 3,614,684 - -1.5 3,614,684 - -2.0 3,614,685 + +0.6 3,614,692 + +0.6 3,614,837 + -0.3 3,614,838 - -1.7 3,614,878 - -0.1 3,614,883 + +1.0 3,614,885 + +1.3 3,614,886 - -1.6 3,614,886 - +0.3 3,614,886 - +0.5 3,614,892 + +0.5 3,614,893 - -0.4 3,614,938 - -1.0 3,614,959 + +1.2 3,615,031 - -0.2 3,615,067 + -0.9 3,615,067 + +0.7 3,615,067 + -0.0 3,615,067 + +0.1 3,615,068 - -0.3 3,615,082 + -0.2 3,615,082 + -1.0 3,615,083 - +0.7 3,615,127 - -0.2 3,615,135 + -0.1 3,615,136 - -1.2 3,615,148 - +0.0 3,615,172 + +0.5 3,615,173 - CA264_15430 0.10 +0.1 3,615,205 - CA264_15430 0.11 -0.1 3,615,339 + CA264_15430 0.16 -0.7 3,615,397 - CA264_15430 0.18 -1.3
Or see this region's nucleotide sequence