Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14530 and CA264_14535 are separated by 8 nucleotides CA264_14535 and CA264_14540 are separated by 268 nucleotides
CA264_14530: CA264_14530 - aspartyl/glutamyl-tRNA amidotransferase subunit A, at 3,408,267 to 3,409,703
_14530
CA264_14535: CA264_14535 - lytic transglycosylase, at 3,409,712 to 3,411,232
_14535
CA264_14540: CA264_14540 - NADP-dependent malic enzyme, at 3,411,501 to 3,413,771
_14540
Position (kb)
3409
3410
3411
3412 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3409.718 kb on + strand at 3409.732 kb on + strand at 3409.924 kb on - strand, within CA264_14535 at 3409.963 kb on + strand, within CA264_14535 at 3409.964 kb on - strand, within CA264_14535 at 3409.964 kb on - strand, within CA264_14535 at 3410.008 kb on - strand, within CA264_14535 at 3410.049 kb on - strand, within CA264_14535 at 3410.102 kb on + strand, within CA264_14535 at 3410.133 kb on + strand, within CA264_14535 at 3410.138 kb on + strand, within CA264_14535 at 3410.139 kb on - strand, within CA264_14535 at 3410.255 kb on + strand, within CA264_14535 at 3410.327 kb on + strand, within CA264_14535 at 3410.327 kb on + strand, within CA264_14535 at 3410.328 kb on - strand, within CA264_14535 at 3410.328 kb on - strand, within CA264_14535 at 3410.328 kb on - strand, within CA264_14535 at 3410.330 kb on + strand, within CA264_14535 at 3410.330 kb on + strand, within CA264_14535 at 3410.330 kb on + strand, within CA264_14535 at 3410.362 kb on + strand, within CA264_14535 at 3410.363 kb on - strand, within CA264_14535 at 3410.465 kb on + strand, within CA264_14535 at 3410.492 kb on + strand, within CA264_14535 at 3410.492 kb on + strand, within CA264_14535 at 3410.504 kb on + strand, within CA264_14535 at 3410.504 kb on + strand, within CA264_14535 at 3410.504 kb on + strand, within CA264_14535 at 3410.505 kb on - strand, within CA264_14535 at 3410.561 kb on + strand, within CA264_14535 at 3410.561 kb on + strand, within CA264_14535 at 3410.571 kb on + strand, within CA264_14535 at 3410.571 kb on + strand, within CA264_14535 at 3410.572 kb on - strand, within CA264_14535 at 3410.688 kb on - strand, within CA264_14535 at 3410.688 kb on - strand, within CA264_14535 at 3410.690 kb on - strand, within CA264_14535 at 3410.752 kb on + strand, within CA264_14535 at 3410.753 kb on - strand, within CA264_14535 at 3410.878 kb on + strand, within CA264_14535 at 3410.882 kb on + strand, within CA264_14535 at 3410.882 kb on + strand, within CA264_14535 at 3410.883 kb on - strand, within CA264_14535 at 3410.883 kb on - strand, within CA264_14535 at 3410.883 kb on - strand, within CA264_14535 at 3410.884 kb on + strand, within CA264_14535 at 3410.884 kb on + strand, within CA264_14535 at 3411.000 kb on + strand, within CA264_14535 at 3411.098 kb on + strand at 3411.143 kb on + strand at 3411.146 kb on - strand at 3411.243 kb on + strand at 3411.243 kb on + strand at 3411.243 kb on + strand at 3411.243 kb on + strand at 3411.244 kb on - strand at 3411.244 kb on - strand at 3411.244 kb on - strand at 3411.256 kb on - strand at 3411.302 kb on - strand at 3411.312 kb on + strand at 3411.346 kb on + strand at 3411.415 kb on + strand at 3411.424 kb on + strand at 3411.469 kb on + strand at 3411.469 kb on + strand at 3411.470 kb on - strand at 3411.478 kb on - strand at 3411.481 kb on + strand at 3411.481 kb on + strand at 3411.482 kb on - strand at 3411.482 kb on - strand at 3411.487 kb on - strand at 3411.531 kb on + strand at 3411.667 kb on + strand at 3411.667 kb on + strand at 3411.667 kb on + strand at 3411.667 kb on + strand at 3411.668 kb on - strand at 3411.669 kb on + strand at 3411.669 kb on + strand at 3411.670 kb on - strand at 3411.671 kb on + strand at 3411.672 kb on - strand at 3411.676 kb on - strand at 3411.676 kb on - strand at 3411.929 kb on + strand, within CA264_14540 at 3412.196 kb on + strand, within CA264_14540 at 3412.218 kb on - strand, within CA264_14540
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 3,409,718 + +0.7 3,409,732 + +0.5 3,409,924 - CA264_14535 0.14 +0.6 3,409,963 + CA264_14535 0.17 +1.2 3,409,964 - CA264_14535 0.17 -1.5 3,409,964 - CA264_14535 0.17 -1.4 3,410,008 - CA264_14535 0.19 -0.6 3,410,049 - CA264_14535 0.22 -0.5 3,410,102 + CA264_14535 0.26 +0.4 3,410,133 + CA264_14535 0.28 +0.2 3,410,138 + CA264_14535 0.28 +0.3 3,410,139 - CA264_14535 0.28 -0.2 3,410,255 + CA264_14535 0.36 -0.6 3,410,327 + CA264_14535 0.40 +0.6 3,410,327 + CA264_14535 0.40 +0.5 3,410,328 - CA264_14535 0.40 +0.4 3,410,328 - CA264_14535 0.40 +1.2 3,410,328 - CA264_14535 0.40 -0.6 3,410,330 + CA264_14535 0.41 -0.2 3,410,330 + CA264_14535 0.41 +0.5 3,410,330 + CA264_14535 0.41 +0.7 3,410,362 + CA264_14535 0.43 +0.6 3,410,363 - CA264_14535 0.43 -0.6 3,410,465 + CA264_14535 0.50 +0.2 3,410,492 + CA264_14535 0.51 +0.3 3,410,492 + CA264_14535 0.51 -0.7 3,410,504 + CA264_14535 0.52 -1.3 3,410,504 + CA264_14535 0.52 +0.7 3,410,504 + CA264_14535 0.52 +0.6 3,410,505 - CA264_14535 0.52 -1.3 3,410,561 + CA264_14535 0.56 +0.2 3,410,561 + CA264_14535 0.56 +0.9 3,410,571 + CA264_14535 0.56 -0.9 3,410,571 + CA264_14535 0.56 -0.3 3,410,572 - CA264_14535 0.57 -0.2 3,410,688 - CA264_14535 0.64 +0.3 3,410,688 - CA264_14535 0.64 +0.1 3,410,690 - CA264_14535 0.64 +0.7 3,410,752 + CA264_14535 0.68 +0.0 3,410,753 - CA264_14535 0.68 +0.1 3,410,878 + CA264_14535 0.77 +0.1 3,410,882 + CA264_14535 0.77 -0.9 3,410,882 + CA264_14535 0.77 +1.6 3,410,883 - CA264_14535 0.77 -0.1 3,410,883 - CA264_14535 0.77 -0.0 3,410,883 - CA264_14535 0.77 +0.6 3,410,884 + CA264_14535 0.77 +0.9 3,410,884 + CA264_14535 0.77 +0.2 3,411,000 + CA264_14535 0.85 -0.8 3,411,098 + -0.4 3,411,143 + -0.4 3,411,146 - +1.4 3,411,243 + -0.5 3,411,243 + -1.3 3,411,243 + -0.5 3,411,243 + +0.6 3,411,244 - -0.0 3,411,244 - +0.6 3,411,244 - -1.9 3,411,256 - +0.2 3,411,302 - +0.2 3,411,312 + -2.6 3,411,346 + +0.1 3,411,415 + -0.0 3,411,424 + -1.3 3,411,469 + -1.8 3,411,469 + -0.1 3,411,470 - +0.2 3,411,478 - +0.1 3,411,481 + +0.9 3,411,481 + -1.8 3,411,482 - -0.4 3,411,482 - -2.1 3,411,487 - -1.4 3,411,531 + -2.3 3,411,667 + -0.7 3,411,667 + -3.4 3,411,667 + -1.7 3,411,667 + -3.8 3,411,668 - -1.2 3,411,669 + -3.4 3,411,669 + -2.5 3,411,670 - -0.9 3,411,671 + -1.1 3,411,672 - -3.1 3,411,676 - -4.4 3,411,676 - -2.8 3,411,929 + CA264_14540 0.19 -1.2 3,412,196 + CA264_14540 0.31 -1.3 3,412,218 - CA264_14540 0.32 -1.7
Or see this region's nucleotide sequence