Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13775 and CA264_13780 are separated by 163 nucleotides CA264_13780 and CA264_13785 are separated by 112 nucleotides CA264_13785 and CA264_13790 are separated by 60 nucleotides CA264_13790 and CA264_13795 are separated by 4 nucleotides
CA264_13775: CA264_13775 - hypothetical protein, at 3,218,716 to 3,220,203
_13775
CA264_13780: CA264_13780 - ribonuclease Y, at 3,220,367 to 3,221,965
_13780
CA264_13785: CA264_13785 - cell division protein ZapA, at 3,222,078 to 3,222,365
_13785
CA264_13790: CA264_13790 - hypothetical protein, at 3,222,426 to 3,222,722
_13790
CA264_13795: CA264_13795 - phenylalanine--tRNA ligase subunit beta, at 3,222,727 to 3,225,144
_13795
Position (kb)
3220
3221
3222 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3219.439 kb on + strand, within CA264_13775 at 3219.471 kb on + strand, within CA264_13775 at 3219.474 kb on + strand, within CA264_13775 at 3219.474 kb on + strand, within CA264_13775 at 3219.474 kb on + strand, within CA264_13775 at 3219.482 kb on + strand, within CA264_13775 at 3219.499 kb on - strand, within CA264_13775 at 3219.508 kb on + strand, within CA264_13775 at 3219.509 kb on - strand, within CA264_13775 at 3219.546 kb on - strand, within CA264_13775 at 3219.598 kb on - strand, within CA264_13775 at 3219.598 kb on - strand, within CA264_13775 at 3219.631 kb on - strand, within CA264_13775 at 3219.662 kb on + strand, within CA264_13775 at 3219.801 kb on + strand, within CA264_13775 at 3219.896 kb on + strand, within CA264_13775 at 3219.912 kb on - strand, within CA264_13775 at 3219.912 kb on - strand, within CA264_13775 at 3219.912 kb on - strand, within CA264_13775 at 3219.955 kb on - strand, within CA264_13775 at 3219.955 kb on - strand, within CA264_13775 at 3219.998 kb on - strand, within CA264_13775 at 3219.998 kb on - strand, within CA264_13775 at 3219.998 kb on - strand, within CA264_13775 at 3220.016 kb on + strand, within CA264_13775 at 3220.054 kb on - strand, within CA264_13775 at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.172 kb on - strand at 3220.172 kb on - strand at 3220.172 kb on - strand at 3220.172 kb on - strand at 3220.175 kb on + strand at 3220.176 kb on - strand at 3220.195 kb on - strand at 3220.202 kb on - strand at 3220.295 kb on - strand at 3220.352 kb on - strand at 3220.360 kb on - strand at 3221.969 kb on + strand at 3221.969 kb on + strand at 3221.970 kb on - strand at 3221.989 kb on - strand at 3221.995 kb on + strand at 3221.996 kb on - strand at 3221.996 kb on - strand at 3221.996 kb on - strand at 3221.998 kb on - strand at 3222.086 kb on + strand at 3222.097 kb on - strand at 3222.525 kb on - strand, within CA264_13790 at 3222.536 kb on + strand, within CA264_13790 at 3222.537 kb on - strand, within CA264_13790 at 3222.610 kb on - strand, within CA264_13790 at 3222.728 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 3,219,439 + CA264_13775 0.49 +2.2 3,219,471 + CA264_13775 0.51 -1.9 3,219,474 + CA264_13775 0.51 +1.6 3,219,474 + CA264_13775 0.51 +3.2 3,219,474 + CA264_13775 0.51 +1.5 3,219,482 + CA264_13775 0.51 +2.0 3,219,499 - CA264_13775 0.53 -0.2 3,219,508 + CA264_13775 0.53 +0.9 3,219,509 - CA264_13775 0.53 -1.1 3,219,546 - CA264_13775 0.56 +0.6 3,219,598 - CA264_13775 0.59 -2.5 3,219,598 - CA264_13775 0.59 +0.0 3,219,631 - CA264_13775 0.61 +0.3 3,219,662 + CA264_13775 0.64 +1.3 3,219,801 + CA264_13775 0.73 +2.0 3,219,896 + CA264_13775 0.79 +0.7 3,219,912 - CA264_13775 0.80 +1.0 3,219,912 - CA264_13775 0.80 +0.2 3,219,912 - CA264_13775 0.80 +2.5 3,219,955 - CA264_13775 0.83 -1.1 3,219,955 - CA264_13775 0.83 +0.8 3,219,998 - CA264_13775 0.86 -1.2 3,219,998 - CA264_13775 0.86 +0.1 3,219,998 - CA264_13775 0.86 -0.7 3,220,016 + CA264_13775 0.87 +2.2 3,220,054 - CA264_13775 0.90 +0.0 3,220,171 + +1.2 3,220,171 + +1.8 3,220,171 + +1.7 3,220,171 + -0.1 3,220,171 + +1.3 3,220,172 - +1.2 3,220,172 - +0.4 3,220,172 - +0.5 3,220,172 - +1.3 3,220,175 + +0.7 3,220,176 - +1.3 3,220,195 - +0.5 3,220,202 - -0.4 3,220,295 - -0.4 3,220,352 - +1.0 3,220,360 - +2.0 3,221,969 + +0.5 3,221,969 + +0.5 3,221,970 - -1.1 3,221,989 - -1.1 3,221,995 + -0.7 3,221,996 - -0.5 3,221,996 - -0.9 3,221,996 - -0.5 3,221,998 - -1.8 3,222,086 + -0.4 3,222,097 - -0.1 3,222,525 - CA264_13790 0.33 +0.6 3,222,536 + CA264_13790 0.37 -1.2 3,222,537 - CA264_13790 0.37 -0.9 3,222,610 - CA264_13790 0.62 -1.6 3,222,728 + -0.2
Or see this region's nucleotide sequence