Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12110 and CA264_12115 overlap by 4 nucleotides CA264_12115 and CA264_12120 overlap by 11 nucleotides
CA264_12110: CA264_12110 - glycosyltransferase, at 2,824,013 to 2,825,122
_12110
CA264_12115: CA264_12115 - hypothetical protein, at 2,825,119 to 2,826,225
_12115
CA264_12120: CA264_12120 - glycosyltransferase, at 2,826,215 to 2,827,357
_12120
Position (kb)
2825
2826
2827 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2824.156 kb on + strand, within CA264_12110 at 2824.156 kb on + strand, within CA264_12110 at 2824.448 kb on + strand, within CA264_12110 at 2824.461 kb on + strand, within CA264_12110 at 2824.630 kb on - strand, within CA264_12110 at 2824.657 kb on - strand, within CA264_12110 at 2824.713 kb on + strand, within CA264_12110 at 2824.714 kb on - strand, within CA264_12110 at 2824.717 kb on + strand, within CA264_12110 at 2824.718 kb on - strand, within CA264_12110 at 2824.718 kb on - strand, within CA264_12110 at 2824.746 kb on + strand, within CA264_12110 at 2824.747 kb on - strand, within CA264_12110 at 2824.794 kb on + strand, within CA264_12110 at 2824.795 kb on - strand, within CA264_12110 at 2824.861 kb on - strand, within CA264_12110 at 2824.936 kb on - strand, within CA264_12110 at 2824.953 kb on + strand, within CA264_12110 at 2825.036 kb on + strand at 2825.037 kb on - strand at 2825.112 kb on - strand at 2825.137 kb on - strand at 2825.191 kb on - strand at 2825.192 kb on + strand at 2825.192 kb on + strand at 2825.193 kb on - strand at 2825.306 kb on - strand, within CA264_12115 at 2825.443 kb on - strand, within CA264_12115 at 2825.484 kb on + strand, within CA264_12115 at 2825.484 kb on + strand, within CA264_12115 at 2825.485 kb on - strand, within CA264_12115 at 2825.487 kb on + strand, within CA264_12115 at 2825.487 kb on + strand, within CA264_12115 at 2825.487 kb on + strand, within CA264_12115 at 2825.489 kb on + strand, within CA264_12115 at 2825.509 kb on - strand, within CA264_12115 at 2825.509 kb on - strand, within CA264_12115 at 2825.712 kb on - strand, within CA264_12115 at 2825.755 kb on + strand, within CA264_12115 at 2825.795 kb on + strand, within CA264_12115 at 2825.960 kb on - strand, within CA264_12115 at 2825.997 kb on + strand, within CA264_12115 at 2826.031 kb on + strand, within CA264_12115 at 2826.080 kb on + strand, within CA264_12115 at 2826.133 kb on + strand at 2826.146 kb on + strand at 2826.147 kb on - strand at 2826.147 kb on - strand at 2826.147 kb on - strand at 2826.147 kb on - strand at 2826.269 kb on + strand at 2826.269 kb on + strand at 2826.345 kb on - strand, within CA264_12120 at 2826.559 kb on - strand, within CA264_12120 at 2826.590 kb on - strand, within CA264_12120 at 2826.591 kb on + strand, within CA264_12120 at 2826.592 kb on - strand, within CA264_12120 at 2826.622 kb on + strand, within CA264_12120 at 2826.897 kb on - strand, within CA264_12120 at 2827.013 kb on - strand, within CA264_12120 at 2827.014 kb on + strand, within CA264_12120 at 2827.015 kb on - strand, within CA264_12120
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 2,824,156 + CA264_12110 0.13 -1.1 2,824,156 + CA264_12110 0.13 -1.1 2,824,448 + CA264_12110 0.39 -1.2 2,824,461 + CA264_12110 0.40 -1.9 2,824,630 - CA264_12110 0.56 -1.1 2,824,657 - CA264_12110 0.58 -2.2 2,824,713 + CA264_12110 0.63 +0.0 2,824,714 - CA264_12110 0.63 -0.8 2,824,717 + CA264_12110 0.63 -0.7 2,824,718 - CA264_12110 0.64 +0.4 2,824,718 - CA264_12110 0.64 -1.0 2,824,746 + CA264_12110 0.66 +0.8 2,824,747 - CA264_12110 0.66 -1.5 2,824,794 + CA264_12110 0.70 -0.4 2,824,795 - CA264_12110 0.70 -0.5 2,824,861 - CA264_12110 0.76 -0.2 2,824,936 - CA264_12110 0.83 -0.1 2,824,953 + CA264_12110 0.85 -0.2 2,825,036 + -0.6 2,825,037 - +0.3 2,825,112 - -0.7 2,825,137 - -2.6 2,825,191 - +0.3 2,825,192 + -0.8 2,825,192 + +0.2 2,825,193 - -0.9 2,825,306 - CA264_12115 0.17 -1.2 2,825,443 - CA264_12115 0.29 +0.3 2,825,484 + CA264_12115 0.33 +0.1 2,825,484 + CA264_12115 0.33 +0.2 2,825,485 - CA264_12115 0.33 -0.8 2,825,487 + CA264_12115 0.33 -0.4 2,825,487 + CA264_12115 0.33 +0.3 2,825,487 + CA264_12115 0.33 -2.5 2,825,489 + CA264_12115 0.33 +0.0 2,825,509 - CA264_12115 0.35 +0.4 2,825,509 - CA264_12115 0.35 -1.4 2,825,712 - CA264_12115 0.54 -1.4 2,825,755 + CA264_12115 0.57 -0.4 2,825,795 + CA264_12115 0.61 -0.3 2,825,960 - CA264_12115 0.76 -0.8 2,825,997 + CA264_12115 0.79 +0.6 2,826,031 + CA264_12115 0.82 -2.0 2,826,080 + CA264_12115 0.87 -0.4 2,826,133 + +0.2 2,826,146 + +1.0 2,826,147 - -0.5 2,826,147 - -0.3 2,826,147 - -4.0 2,826,147 - -0.8 2,826,269 + +0.9 2,826,269 + -0.8 2,826,345 - CA264_12120 0.11 -1.3 2,826,559 - CA264_12120 0.30 -1.4 2,826,590 - CA264_12120 0.33 -2.5 2,826,591 + CA264_12120 0.33 +0.1 2,826,592 - CA264_12120 0.33 -0.1 2,826,622 + CA264_12120 0.36 +0.7 2,826,897 - CA264_12120 0.60 -0.8 2,827,013 - CA264_12120 0.70 +0.8 2,827,014 + CA264_12120 0.70 -0.8 2,827,015 - CA264_12120 0.70 -0.8
Or see this region's nucleotide sequence