Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11720 and CA264_11725 are separated by 143 nucleotides CA264_11725 and CA264_11730 overlap by 26 nucleotides CA264_11730 and CA264_11735 are separated by 271 nucleotides
CA264_11720: CA264_11720 - hypothetical protein, at 2,729,998 to 2,730,930
_11720
CA264_11725: CA264_11725 - hypothetical protein, at 2,731,074 to 2,731,466
_11725
CA264_11730: CA264_11730 - hypothetical protein, at 2,731,441 to 2,732,391
_11730
CA264_11735: CA264_11735 - hypothetical protein, at 2,732,663 to 2,733,385
_11735
Position (kb)
2731
2732
2733 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2730.470 kb on + strand, within CA264_11720 at 2730.539 kb on + strand, within CA264_11720 at 2730.713 kb on + strand, within CA264_11720 at 2730.844 kb on + strand at 2730.844 kb on + strand at 2730.944 kb on - strand at 2731.048 kb on - strand at 2731.061 kb on - strand at 2731.061 kb on - strand at 2731.062 kb on + strand at 2731.109 kb on + strand at 2731.421 kb on - strand, within CA264_11725 at 2731.421 kb on - strand, within CA264_11725 at 2731.433 kb on - strand at 2731.433 kb on - strand at 2731.459 kb on + strand at 2731.518 kb on - strand at 2731.540 kb on - strand, within CA264_11730 at 2731.640 kb on + strand, within CA264_11730 at 2731.659 kb on + strand, within CA264_11730 at 2731.659 kb on + strand, within CA264_11730 at 2731.694 kb on - strand, within CA264_11730 at 2731.694 kb on - strand, within CA264_11730 at 2731.695 kb on + strand, within CA264_11730 at 2731.727 kb on - strand, within CA264_11730 at 2731.778 kb on - strand, within CA264_11730 at 2731.793 kb on - strand, within CA264_11730 at 2731.873 kb on + strand, within CA264_11730 at 2731.930 kb on - strand, within CA264_11730 at 2731.935 kb on - strand, within CA264_11730 at 2731.939 kb on + strand, within CA264_11730 at 2731.940 kb on - strand, within CA264_11730 at 2732.037 kb on + strand, within CA264_11730 at 2732.132 kb on - strand, within CA264_11730 at 2732.181 kb on + strand, within CA264_11730 at 2732.187 kb on - strand, within CA264_11730 at 2732.267 kb on + strand, within CA264_11730 at 2732.329 kb on + strand at 2732.330 kb on - strand at 2732.330 kb on - strand at 2732.342 kb on - strand at 2732.503 kb on + strand at 2732.504 kb on - strand at 2732.528 kb on + strand at 2732.529 kb on - strand at 2732.529 kb on - strand at 2732.573 kb on + strand at 2732.574 kb on - strand at 2732.598 kb on + strand at 2732.628 kb on + strand at 2732.628 kb on + strand at 2732.628 kb on + strand at 2732.628 kb on + strand at 2732.628 kb on + strand at 2732.628 kb on + strand at 2732.628 kb on + strand at 2732.629 kb on - strand at 2732.629 kb on - strand at 2732.629 kb on - strand at 2732.664 kb on + strand at 2732.665 kb on - strand at 2732.719 kb on + strand at 2732.720 kb on - strand at 2732.771 kb on + strand, within CA264_11735 at 2732.771 kb on + strand, within CA264_11735 at 2732.772 kb on - strand, within CA264_11735 at 2732.774 kb on + strand, within CA264_11735 at 2732.775 kb on - strand, within CA264_11735 at 2732.775 kb on - strand, within CA264_11735 at 2732.800 kb on - strand, within CA264_11735 at 2732.801 kb on + strand, within CA264_11735 at 2732.802 kb on - strand, within CA264_11735 at 2732.802 kb on - strand, within CA264_11735 at 2732.849 kb on + strand, within CA264_11735 at 2732.849 kb on + strand, within CA264_11735 at 2732.850 kb on - strand, within CA264_11735 at 2732.850 kb on - strand, within CA264_11735 at 2732.854 kb on - strand, within CA264_11735 at 2733.036 kb on + strand, within CA264_11735 at 2733.037 kb on - strand, within CA264_11735 at 2733.092 kb on - strand, within CA264_11735 at 2733.136 kb on + strand, within CA264_11735 at 2733.137 kb on - strand, within CA264_11735 at 2733.137 kb on - strand, within CA264_11735 at 2733.145 kb on + strand, within CA264_11735 at 2733.145 kb on + strand, within CA264_11735 at 2733.146 kb on - strand, within CA264_11735 at 2733.154 kb on + strand, within CA264_11735 at 2733.154 kb on + strand, within CA264_11735 at 2733.154 kb on + strand, within CA264_11735 at 2733.155 kb on - strand, within CA264_11735 at 2733.277 kb on + strand, within CA264_11735 at 2733.281 kb on - strand, within CA264_11735 at 2733.281 kb on - strand, within CA264_11735 at 2733.390 kb on + strand at 2733.390 kb on + strand at 2733.390 kb on + strand at 2733.390 kb on + strand at 2733.391 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 2,730,470 + CA264_11720 0.51 +0.1 2,730,539 + CA264_11720 0.58 +1.3 2,730,713 + CA264_11720 0.77 +0.5 2,730,844 + +0.6 2,730,844 + -0.2 2,730,944 - +0.6 2,731,048 - +0.1 2,731,061 - -1.3 2,731,061 - -1.2 2,731,062 + -0.9 2,731,109 + +0.1 2,731,421 - CA264_11725 0.88 -0.9 2,731,421 - CA264_11725 0.88 -0.2 2,731,433 - -0.5 2,731,433 - +0.2 2,731,459 + +1.2 2,731,518 - +1.6 2,731,540 - CA264_11730 0.10 -0.1 2,731,640 + CA264_11730 0.21 -1.9 2,731,659 + CA264_11730 0.23 -0.0 2,731,659 + CA264_11730 0.23 -0.5 2,731,694 - CA264_11730 0.27 -0.3 2,731,694 - CA264_11730 0.27 -2.3 2,731,695 + CA264_11730 0.27 -0.5 2,731,727 - CA264_11730 0.30 -1.4 2,731,778 - CA264_11730 0.35 -1.0 2,731,793 - CA264_11730 0.37 -1.4 2,731,873 + CA264_11730 0.45 -0.8 2,731,930 - CA264_11730 0.51 -1.0 2,731,935 - CA264_11730 0.52 -0.8 2,731,939 + CA264_11730 0.52 -0.0 2,731,940 - CA264_11730 0.52 -2.1 2,732,037 + CA264_11730 0.63 -0.1 2,732,132 - CA264_11730 0.73 -0.1 2,732,181 + CA264_11730 0.78 -0.8 2,732,187 - CA264_11730 0.78 -0.7 2,732,267 + CA264_11730 0.87 +1.5 2,732,329 + +0.5 2,732,330 - -1.0 2,732,330 - -1.1 2,732,342 - -2.2 2,732,503 + +0.9 2,732,504 - -0.1 2,732,528 + -0.6 2,732,529 - -0.6 2,732,529 - +0.3 2,732,573 + -0.6 2,732,574 - +0.2 2,732,598 + +1.3 2,732,628 + -0.2 2,732,628 + -1.5 2,732,628 + +1.9 2,732,628 + -0.2 2,732,628 + +0.5 2,732,628 + +1.8 2,732,628 + -1.4 2,732,629 - -1.5 2,732,629 - -0.0 2,732,629 - +0.6 2,732,664 + -0.2 2,732,665 - -1.5 2,732,719 + -0.1 2,732,720 - -0.0 2,732,771 + CA264_11735 0.15 +0.1 2,732,771 + CA264_11735 0.15 -0.5 2,732,772 - CA264_11735 0.15 +0.2 2,732,774 + CA264_11735 0.15 +0.1 2,732,775 - CA264_11735 0.15 -0.3 2,732,775 - CA264_11735 0.15 +0.1 2,732,800 - CA264_11735 0.19 +0.1 2,732,801 + CA264_11735 0.19 +0.1 2,732,802 - CA264_11735 0.19 +0.1 2,732,802 - CA264_11735 0.19 +0.2 2,732,849 + CA264_11735 0.26 -0.4 2,732,849 + CA264_11735 0.26 -2.0 2,732,850 - CA264_11735 0.26 +0.2 2,732,850 - CA264_11735 0.26 +0.9 2,732,854 - CA264_11735 0.26 +0.1 2,733,036 + CA264_11735 0.52 -0.6 2,733,037 - CA264_11735 0.52 +0.7 2,733,092 - CA264_11735 0.59 -0.2 2,733,136 + CA264_11735 0.65 -0.6 2,733,137 - CA264_11735 0.66 -1.1 2,733,137 - CA264_11735 0.66 -0.6 2,733,145 + CA264_11735 0.67 +0.0 2,733,145 + CA264_11735 0.67 -0.1 2,733,146 - CA264_11735 0.67 -0.2 2,733,154 + CA264_11735 0.68 -0.8 2,733,154 + CA264_11735 0.68 -0.2 2,733,154 + CA264_11735 0.68 -0.1 2,733,155 - CA264_11735 0.68 +0.0 2,733,277 + CA264_11735 0.85 +1.0 2,733,281 - CA264_11735 0.85 +0.3 2,733,281 - CA264_11735 0.85 +0.1 2,733,390 + +0.1 2,733,390 + -2.2 2,733,390 + -1.1 2,733,390 + +0.7 2,733,391 - +0.0
Or see this region's nucleotide sequence