Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10475 and CA264_10480 are separated by 80 nucleotides CA264_10480 and CA264_10485 are separated by 86 nucleotides
CA264_10475: CA264_10475 - AI-2E family transporter, at 2,429,061 to 2,430,149
_10475
CA264_10480: CA264_10480 - AI-2E family transporter, at 2,430,230 to 2,431,405
_10480
CA264_10485: CA264_10485 - lipoprotein-releasing system ATP-binding protein LolD, at 2,431,492 to 2,432,145
_10485
Position (kb)
2430
2431
2432 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2429.293 kb on + strand, within CA264_10475 at 2429.294 kb on - strand, within CA264_10475 at 2429.338 kb on + strand, within CA264_10475 at 2429.339 kb on - strand, within CA264_10475 at 2429.400 kb on + strand, within CA264_10475 at 2429.543 kb on - strand, within CA264_10475 at 2429.543 kb on - strand, within CA264_10475 at 2429.570 kb on + strand, within CA264_10475 at 2429.570 kb on + strand, within CA264_10475 at 2429.577 kb on + strand, within CA264_10475 at 2429.577 kb on + strand, within CA264_10475 at 2429.578 kb on - strand, within CA264_10475 at 2429.630 kb on - strand, within CA264_10475 at 2429.630 kb on - strand, within CA264_10475 at 2429.630 kb on - strand, within CA264_10475 at 2429.630 kb on - strand, within CA264_10475 at 2429.649 kb on + strand, within CA264_10475 at 2429.798 kb on - strand, within CA264_10475 at 2429.819 kb on - strand, within CA264_10475 at 2429.845 kb on + strand, within CA264_10475 at 2429.880 kb on + strand, within CA264_10475 at 2429.907 kb on + strand, within CA264_10475 at 2429.908 kb on - strand, within CA264_10475 at 2429.908 kb on - strand, within CA264_10475 at 2429.908 kb on - strand, within CA264_10475 at 2429.908 kb on - strand, within CA264_10475 at 2429.908 kb on - strand, within CA264_10475 at 2429.908 kb on - strand, within CA264_10475 at 2429.977 kb on + strand, within CA264_10475 at 2429.977 kb on + strand, within CA264_10475 at 2429.983 kb on + strand, within CA264_10475 at 2429.984 kb on - strand, within CA264_10475 at 2429.984 kb on - strand, within CA264_10475 at 2429.988 kb on - strand, within CA264_10475 at 2430.063 kb on + strand at 2430.063 kb on + strand at 2430.064 kb on - strand at 2430.064 kb on - strand at 2430.064 kb on - strand at 2430.064 kb on - strand at 2430.147 kb on + strand at 2430.147 kb on + strand at 2430.178 kb on + strand at 2430.182 kb on + strand at 2430.183 kb on - strand at 2430.183 kb on - strand at 2430.189 kb on + strand at 2430.194 kb on + strand at 2430.195 kb on - strand at 2430.195 kb on - strand at 2430.197 kb on + strand at 2430.205 kb on + strand at 2430.205 kb on + strand at 2430.206 kb on - strand at 2430.206 kb on - strand at 2430.213 kb on + strand at 2430.224 kb on - strand at 2430.229 kb on + strand at 2430.229 kb on + strand at 2430.239 kb on + strand at 2430.257 kb on - strand at 2430.260 kb on - strand at 2430.262 kb on - strand at 2430.303 kb on - strand at 2430.303 kb on - strand at 2430.438 kb on + strand, within CA264_10480 at 2430.438 kb on + strand, within CA264_10480 at 2430.438 kb on + strand, within CA264_10480 at 2430.458 kb on - strand, within CA264_10480 at 2430.460 kb on + strand, within CA264_10480 at 2430.733 kb on + strand, within CA264_10480 at 2430.734 kb on - strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.846 kb on - strand, within CA264_10480 at 2430.846 kb on - strand, within CA264_10480 at 2430.846 kb on - strand, within CA264_10480 at 2430.850 kb on + strand, within CA264_10480 at 2430.871 kb on - strand, within CA264_10480 at 2430.914 kb on - strand, within CA264_10480 at 2430.922 kb on + strand, within CA264_10480 at 2430.930 kb on + strand, within CA264_10480 at 2430.947 kb on + strand, within CA264_10480 at 2431.075 kb on - strand, within CA264_10480 at 2431.076 kb on + strand, within CA264_10480 at 2431.077 kb on - strand, within CA264_10480 at 2431.095 kb on + strand, within CA264_10480 at 2431.096 kb on - strand, within CA264_10480 at 2431.096 kb on - strand, within CA264_10480 at 2431.103 kb on + strand, within CA264_10480 at 2431.103 kb on + strand, within CA264_10480 at 2431.111 kb on + strand, within CA264_10480 at 2431.200 kb on + strand, within CA264_10480 at 2431.415 kb on + strand at 2431.415 kb on + strand at 2431.416 kb on - strand at 2431.421 kb on + strand at 2431.422 kb on - strand at 2431.469 kb on + strand at 2431.470 kb on - strand at 2431.470 kb on - strand at 2431.471 kb on + strand at 2431.472 kb on - strand at 2431.477 kb on - strand at 2432.144 kb on - strand at 2432.156 kb on - strand at 2432.164 kb on - strand at 2432.171 kb on + strand at 2432.171 kb on + strand at 2432.177 kb on + strand at 2432.177 kb on + strand at 2432.177 kb on + strand at 2432.178 kb on - strand at 2432.178 kb on - strand at 2432.202 kb on + strand at 2432.223 kb on - strand at 2432.223 kb on - strand at 2432.236 kb on + strand at 2432.236 kb on + strand at 2432.237 kb on - strand at 2432.251 kb on - strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.257 kb on - strand at 2432.266 kb on + strand at 2432.267 kb on - strand at 2432.269 kb on - strand at 2432.269 kb on - strand at 2432.312 kb on - strand at 2432.314 kb on - strand at 2432.374 kb on - strand at 2432.377 kb on + strand at 2432.377 kb on + strand at 2432.377 kb on + strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 2,429,293 + CA264_10475 0.21 +0.3 2,429,294 - CA264_10475 0.21 +0.1 2,429,338 + CA264_10475 0.25 +1.5 2,429,339 - CA264_10475 0.26 -0.3 2,429,400 + CA264_10475 0.31 -1.0 2,429,543 - CA264_10475 0.44 +0.7 2,429,543 - CA264_10475 0.44 +0.2 2,429,570 + CA264_10475 0.47 -0.7 2,429,570 + CA264_10475 0.47 +0.2 2,429,577 + CA264_10475 0.47 +0.1 2,429,577 + CA264_10475 0.47 +1.5 2,429,578 - CA264_10475 0.47 -1.3 2,429,630 - CA264_10475 0.52 +1.1 2,429,630 - CA264_10475 0.52 -0.4 2,429,630 - CA264_10475 0.52 -0.1 2,429,630 - CA264_10475 0.52 +0.5 2,429,649 + CA264_10475 0.54 +0.7 2,429,798 - CA264_10475 0.68 +0.9 2,429,819 - CA264_10475 0.70 +0.1 2,429,845 + CA264_10475 0.72 +0.6 2,429,880 + CA264_10475 0.75 +1.7 2,429,907 + CA264_10475 0.78 -0.3 2,429,908 - CA264_10475 0.78 +0.2 2,429,908 - CA264_10475 0.78 +0.4 2,429,908 - CA264_10475 0.78 -0.3 2,429,908 - CA264_10475 0.78 -0.1 2,429,908 - CA264_10475 0.78 -0.1 2,429,908 - CA264_10475 0.78 -0.0 2,429,977 + CA264_10475 0.84 +0.6 2,429,977 + CA264_10475 0.84 +1.2 2,429,983 + CA264_10475 0.85 +1.1 2,429,984 - CA264_10475 0.85 +0.6 2,429,984 - CA264_10475 0.85 +0.8 2,429,988 - CA264_10475 0.85 -0.0 2,430,063 + +0.8 2,430,063 + +0.8 2,430,064 - +0.1 2,430,064 - -0.9 2,430,064 - -0.5 2,430,064 - +0.6 2,430,147 + +0.2 2,430,147 + +0.0 2,430,178 + +3.2 2,430,182 + -0.4 2,430,183 - -0.4 2,430,183 - +0.6 2,430,189 + +0.1 2,430,194 + -1.1 2,430,195 - +0.7 2,430,195 - +0.3 2,430,197 + +0.1 2,430,205 + -0.1 2,430,205 + +0.1 2,430,206 - -0.5 2,430,206 - -0.9 2,430,213 + +0.3 2,430,224 - +0.1 2,430,229 + +0.7 2,430,229 + -0.2 2,430,239 + -0.6 2,430,257 - -0.4 2,430,260 - -0.5 2,430,262 - +1.2 2,430,303 - +1.6 2,430,303 - -0.5 2,430,438 + CA264_10480 0.18 -0.5 2,430,438 + CA264_10480 0.18 -3.1 2,430,438 + CA264_10480 0.18 +0.6 2,430,458 - CA264_10480 0.19 -0.5 2,430,460 + CA264_10480 0.20 -0.5 2,430,733 + CA264_10480 0.43 -0.7 2,430,734 - CA264_10480 0.43 -1.3 2,430,845 + CA264_10480 0.52 -0.9 2,430,845 + CA264_10480 0.52 -0.5 2,430,845 + CA264_10480 0.52 +0.2 2,430,845 + CA264_10480 0.52 -0.2 2,430,845 + CA264_10480 0.52 -0.3 2,430,845 + CA264_10480 0.52 +0.0 2,430,846 - CA264_10480 0.52 -1.0 2,430,846 - CA264_10480 0.52 -0.1 2,430,846 - CA264_10480 0.52 -0.1 2,430,850 + CA264_10480 0.53 +0.7 2,430,871 - CA264_10480 0.55 +0.8 2,430,914 - CA264_10480 0.58 +1.1 2,430,922 + CA264_10480 0.59 +0.2 2,430,930 + CA264_10480 0.60 +0.5 2,430,947 + CA264_10480 0.61 -0.4 2,431,075 - CA264_10480 0.72 +0.9 2,431,076 + CA264_10480 0.72 +0.2 2,431,077 - CA264_10480 0.72 -0.3 2,431,095 + CA264_10480 0.74 -0.2 2,431,096 - CA264_10480 0.74 +0.4 2,431,096 - CA264_10480 0.74 +0.2 2,431,103 + CA264_10480 0.74 +0.7 2,431,103 + CA264_10480 0.74 +0.7 2,431,111 + CA264_10480 0.75 +0.3 2,431,200 + CA264_10480 0.82 +1.2 2,431,415 + +0.1 2,431,415 + +0.8 2,431,416 - -0.5 2,431,421 + -0.4 2,431,422 - -0.7 2,431,469 + -0.9 2,431,470 - +0.0 2,431,470 - -0.2 2,431,471 + +0.2 2,431,472 - -0.1 2,431,477 - +0.8 2,432,144 - -1.3 2,432,156 - +0.0 2,432,164 - -1.1 2,432,171 + -0.7 2,432,171 + -0.5 2,432,177 + -1.4 2,432,177 + -2.1 2,432,177 + -2.0 2,432,178 - +0.8 2,432,178 - -1.3 2,432,202 + +2.5 2,432,223 - +0.6 2,432,223 - -1.7 2,432,236 + +0.9 2,432,236 + -0.5 2,432,237 - -0.8 2,432,251 - -3.0 2,432,256 + -0.9 2,432,256 + +0.9 2,432,256 + +0.0 2,432,256 + +0.6 2,432,256 + +0.4 2,432,257 - +1.0 2,432,266 + +0.1 2,432,267 - -1.9 2,432,269 - -0.9 2,432,269 - +0.6 2,432,312 - -0.8 2,432,314 - -0.3 2,432,374 - +0.3 2,432,377 + +0.0 2,432,377 + -1.3 2,432,377 + +0.7 2,432,378 - -0.1 2,432,378 - -3.4 2,432,378 - +0.5 2,432,378 - +0.1 2,432,378 - -2.1 2,432,379 + +1.1 2,432,379 + -0.8 2,432,379 + +0.9 2,432,379 + -0.4 2,432,379 + +0.7 2,432,379 + -0.1 2,432,379 + -0.3 2,432,379 + +0.6 2,432,379 + -0.3 2,432,379 + -0.2 2,432,379 + +1.2 2,432,380 - +0.6 2,432,380 - -0.2 2,432,380 - +1.7 2,432,380 - +0.9 2,432,380 - -0.1
Or see this region's nucleotide sequence