Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05270 and CA264_05275 are separated by 723 nucleotides CA264_05275 and CA264_05280 are separated by 161 nucleotides CA264_05280 and CA264_05285 are separated by 78 nucleotides
CA264_05270: CA264_05270 - phosphoenolpyruvate carboxykinase (ATP), at 1,220,872 to 1,222,485
_05270
CA264_05275: CA264_05275 - MFS transporter, at 1,223,209 to 1,224,657
_05275
CA264_05280: CA264_05280 - hypothetical protein, at 1,224,819 to 1,225,421
_05280
CA264_05285: CA264_05285 - molecular chaperone GroEL, at 1,225,500 to 1,227,134
_05285
Position (kb)
1223
1224
1225 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1222.520 kb on - strand at 1222.520 kb on - strand at 1222.531 kb on - strand at 1222.688 kb on - strand at 1222.720 kb on - strand at 1222.882 kb on - strand at 1222.914 kb on + strand at 1222.960 kb on + strand at 1222.976 kb on - strand at 1222.976 kb on - strand at 1222.979 kb on + strand at 1222.980 kb on - strand at 1222.983 kb on + strand at 1222.986 kb on - strand at 1223.140 kb on + strand at 1223.141 kb on - strand at 1223.151 kb on - strand at 1223.151 kb on - strand at 1223.198 kb on + strand at 1223.435 kb on - strand, within CA264_05275 at 1223.761 kb on + strand, within CA264_05275 at 1224.452 kb on - strand, within CA264_05275 at 1224.526 kb on - strand at 1224.822 kb on + strand at 1224.896 kb on - strand, within CA264_05280 at 1224.945 kb on + strand, within CA264_05280 at 1224.945 kb on + strand, within CA264_05280 at 1224.947 kb on + strand, within CA264_05280 at 1224.948 kb on - strand, within CA264_05280 at 1225.049 kb on + strand, within CA264_05280 at 1225.182 kb on + strand, within CA264_05280 at 1225.184 kb on + strand, within CA264_05280 at 1225.184 kb on + strand, within CA264_05280 at 1225.184 kb on + strand, within CA264_05280 at 1225.188 kb on + strand, within CA264_05280 at 1225.189 kb on - strand, within CA264_05280 at 1225.209 kb on + strand, within CA264_05280 at 1225.211 kb on + strand, within CA264_05280 at 1225.211 kb on + strand, within CA264_05280 at 1225.212 kb on - strand, within CA264_05280 at 1225.216 kb on + strand, within CA264_05280 at 1225.216 kb on + strand, within CA264_05280 at 1225.217 kb on - strand, within CA264_05280 at 1225.400 kb on - strand at 1225.400 kb on - strand at 1225.425 kb on + strand at 1225.426 kb on - strand at 1225.430 kb on + strand at 1225.431 kb on - strand at 1225.462 kb on + strand at 1225.463 kb on - strand at 1225.501 kb on + strand at 1225.502 kb on - strand at 1225.502 kb on - strand at 1225.539 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 1,222,520 - +1.4 1,222,520 - +0.4 1,222,531 - +2.0 1,222,688 - +1.5 1,222,720 - +0.9 1,222,882 - +3.3 1,222,914 + -2.4 1,222,960 + -0.8 1,222,976 - +1.1 1,222,976 - +0.8 1,222,979 + -2.0 1,222,980 - +1.0 1,222,983 + -1.3 1,222,986 - +1.0 1,223,140 + -1.1 1,223,141 - +0.9 1,223,151 - +0.9 1,223,151 - +0.7 1,223,198 + -1.8 1,223,435 - CA264_05275 0.16 -1.0 1,223,761 + CA264_05275 0.38 -1.3 1,224,452 - CA264_05275 0.86 -1.2 1,224,526 - +0.0 1,224,822 + -0.8 1,224,896 - CA264_05280 0.13 +0.7 1,224,945 + CA264_05280 0.21 -0.5 1,224,945 + CA264_05280 0.21 -1.5 1,224,947 + CA264_05280 0.21 +0.0 1,224,948 - CA264_05280 0.21 -1.0 1,225,049 + CA264_05280 0.38 -0.4 1,225,182 + CA264_05280 0.60 -0.2 1,225,184 + CA264_05280 0.61 -1.1 1,225,184 + CA264_05280 0.61 -1.3 1,225,184 + CA264_05280 0.61 -0.1 1,225,188 + CA264_05280 0.61 -2.1 1,225,189 - CA264_05280 0.61 -1.0 1,225,209 + CA264_05280 0.65 -1.1 1,225,211 + CA264_05280 0.65 +1.9 1,225,211 + CA264_05280 0.65 +0.7 1,225,212 - CA264_05280 0.65 -1.1 1,225,216 + CA264_05280 0.66 -1.0 1,225,216 + CA264_05280 0.66 -1.1 1,225,217 - CA264_05280 0.66 -0.1 1,225,400 - -1.1 1,225,400 - -0.4 1,225,425 + -1.2 1,225,426 - +0.1 1,225,430 + -0.8 1,225,431 - -3.0 1,225,462 + -0.6 1,225,463 - +0.3 1,225,501 + -0.5 1,225,502 - -0.3 1,225,502 - -0.1 1,225,539 - +1.3
Or see this region's nucleotide sequence