Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04640 and CA264_04645 are separated by 2 nucleotides CA264_04645 and CA264_04650 are separated by 0 nucleotides CA264_04650 and CA264_04655 are separated by 4 nucleotides
CA264_04640: CA264_04640 - tRNA pseudouridine(55) synthase, at 1,073,854 to 1,074,552
_04640
CA264_04645: CA264_04645 - UDP-diphosphatase, at 1,074,555 to 1,075,388
_04645
CA264_04650: CA264_04650 - hypothetical protein, at 1,075,389 to 1,075,607
_04650
CA264_04655: CA264_04655 - cell division protein, at 1,075,612 to 1,076,508
_04655
Position (kb)
1075
1076 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1074.515 kb on - strand at 1074.515 kb on - strand at 1074.515 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.552 kb on + strand at 1074.552 kb on + strand at 1074.552 kb on + strand at 1074.556 kb on + strand at 1074.556 kb on + strand at 1074.557 kb on - strand at 1074.557 kb on - strand at 1075.403 kb on + strand at 1075.683 kb on + strand at 1075.719 kb on - strand, within CA264_04655 at 1075.766 kb on + strand, within CA264_04655 at 1075.767 kb on - strand, within CA264_04655 at 1075.890 kb on + strand, within CA264_04655 at 1075.891 kb on - strand, within CA264_04655 at 1075.917 kb on - strand, within CA264_04655 at 1076.046 kb on - strand, within CA264_04655 at 1076.046 kb on - strand, within CA264_04655 at 1076.234 kb on + strand, within CA264_04655 at 1076.270 kb on + strand, within CA264_04655 at 1076.270 kb on + strand, within CA264_04655 at 1076.271 kb on - strand, within CA264_04655 at 1076.336 kb on + strand, within CA264_04655 at 1076.336 kb on + strand, within CA264_04655 at 1076.336 kb on + strand, within CA264_04655 at 1076.337 kb on - strand, within CA264_04655 at 1076.398 kb on + strand, within CA264_04655 at 1076.514 kb on - strand at 1076.514 kb on - strand at 1076.516 kb on - strand at 1076.540 kb on - strand at 1076.542 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 1,074,515 - +0.0 1,074,515 - -0.7 1,074,515 - +0.4 1,074,517 - +0.0 1,074,517 - +0.9 1,074,517 - +0.6 1,074,517 - +0.5 1,074,517 - -0.1 1,074,552 + -1.0 1,074,552 + -1.4 1,074,552 + -2.6 1,074,556 + -2.7 1,074,556 + -2.4 1,074,557 - +0.7 1,074,557 - +0.2 1,075,403 + -0.0 1,075,683 + -1.1 1,075,719 - CA264_04655 0.12 -0.4 1,075,766 + CA264_04655 0.17 -1.4 1,075,767 - CA264_04655 0.17 -1.2 1,075,890 + CA264_04655 0.31 -4.2 1,075,891 - CA264_04655 0.31 -0.2 1,075,917 - CA264_04655 0.34 -1.2 1,076,046 - CA264_04655 0.48 -3.0 1,076,046 - CA264_04655 0.48 -1.7 1,076,234 + CA264_04655 0.69 -2.7 1,076,270 + CA264_04655 0.73 -0.3 1,076,270 + CA264_04655 0.73 -1.4 1,076,271 - CA264_04655 0.73 +0.1 1,076,336 + CA264_04655 0.81 -0.8 1,076,336 + CA264_04655 0.81 -3.0 1,076,336 + CA264_04655 0.81 -2.8 1,076,337 - CA264_04655 0.81 -3.2 1,076,398 + CA264_04655 0.88 -1.7 1,076,514 - -0.3 1,076,514 - -0.5 1,076,516 - -0.2 1,076,540 - +1.7 1,076,542 - +0.7
Or see this region's nucleotide sequence