Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04130 and CA264_04135 are separated by 15 nucleotides CA264_04135 and CA264_04140 are separated by 60 nucleotides CA264_04140 and CA264_04145 are separated by 15 nucleotides
CA264_04130: CA264_04130 - hypothetical protein, at 956,881 to 957,735
_04130
CA264_04135: CA264_04135 - hypothetical protein, at 957,751 to 958,164
_04135
CA264_04140: CA264_04140 - cyanophycinase, at 958,225 to 959,118
_04140
CA264_04145: CA264_04145 - hypothetical protein, at 959,134 to 959,526
_04145
Position (kb) 957
958
959 Strain fitness (log2 ratio) -2
-1
0
1
2 at 956.770 kb on - strand at 956.770 kb on - strand at 956.852 kb on + strand at 956.858 kb on + strand at 956.922 kb on + strand at 956.929 kb on + strand at 956.978 kb on - strand, within CA264_04130 at 956.991 kb on - strand, within CA264_04130 at 957.045 kb on + strand, within CA264_04130 at 957.050 kb on - strand, within CA264_04130 at 957.201 kb on + strand, within CA264_04130 at 957.201 kb on + strand, within CA264_04130 at 957.208 kb on - strand, within CA264_04130 at 957.219 kb on + strand, within CA264_04130 at 957.273 kb on + strand, within CA264_04130 at 957.353 kb on + strand, within CA264_04130 at 957.354 kb on - strand, within CA264_04130 at 957.586 kb on + strand, within CA264_04130 at 957.591 kb on + strand, within CA264_04130 at 957.733 kb on + strand at 957.847 kb on - strand, within CA264_04135 at 957.847 kb on - strand, within CA264_04135 at 957.848 kb on + strand, within CA264_04135 at 957.848 kb on + strand, within CA264_04135 at 957.849 kb on - strand, within CA264_04135 at 957.849 kb on - strand, within CA264_04135 at 957.856 kb on + strand, within CA264_04135 at 957.856 kb on + strand, within CA264_04135 at 957.875 kb on - strand, within CA264_04135 at 957.949 kb on + strand, within CA264_04135 at 958.077 kb on + strand, within CA264_04135 at 958.078 kb on - strand, within CA264_04135 at 958.146 kb on + strand at 958.147 kb on - strand at 958.166 kb on - strand at 958.173 kb on + strand at 958.174 kb on - strand at 958.195 kb on + strand at 958.197 kb on + strand at 958.211 kb on + strand at 958.212 kb on - strand at 958.242 kb on - strand at 958.255 kb on - strand at 958.302 kb on - strand at 958.399 kb on - strand, within CA264_04140 at 958.497 kb on - strand, within CA264_04140 at 958.568 kb on + strand, within CA264_04140 at 958.569 kb on - strand, within CA264_04140 at 958.571 kb on + strand, within CA264_04140 at 958.670 kb on - strand, within CA264_04140 at 958.671 kb on + strand, within CA264_04140 at 958.671 kb on + strand, within CA264_04140 at 958.672 kb on - strand, within CA264_04140 at 958.685 kb on + strand, within CA264_04140 at 958.685 kb on + strand, within CA264_04140 at 958.686 kb on - strand, within CA264_04140 at 958.686 kb on - strand, within CA264_04140 at 958.738 kb on + strand, within CA264_04140 at 958.738 kb on + strand, within CA264_04140 at 958.890 kb on + strand, within CA264_04140 at 958.891 kb on - strand, within CA264_04140 at 958.892 kb on + strand, within CA264_04140 at 958.893 kb on - strand, within CA264_04140 at 958.896 kb on + strand, within CA264_04140 at 958.924 kb on + strand, within CA264_04140 at 958.925 kb on - strand, within CA264_04140 at 959.083 kb on + strand at 959.084 kb on - strand at 959.094 kb on + strand at 959.094 kb on + strand at 959.123 kb on + strand at 959.141 kb on - strand at 959.158 kb on - strand at 959.160 kb on - strand at 959.160 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 956,770 - -0.2 956,770 - -0.5 956,852 + +1.0 956,858 + +1.5 956,922 + +0.4 956,929 + -2.7 956,978 - CA264_04130 0.11 +1.0 956,991 - CA264_04130 0.13 +0.1 957,045 + CA264_04130 0.19 +0.3 957,050 - CA264_04130 0.20 -0.5 957,201 + CA264_04130 0.37 +0.1 957,201 + CA264_04130 0.37 -0.8 957,208 - CA264_04130 0.38 +0.9 957,219 + CA264_04130 0.40 +0.6 957,273 + CA264_04130 0.46 -0.4 957,353 + CA264_04130 0.55 -0.7 957,354 - CA264_04130 0.55 -1.6 957,586 + CA264_04130 0.82 +0.9 957,591 + CA264_04130 0.83 +0.0 957,733 + -0.0 957,847 - CA264_04135 0.23 +0.5 957,847 - CA264_04135 0.23 +0.5 957,848 + CA264_04135 0.23 -1.7 957,848 + CA264_04135 0.23 -0.1 957,849 - CA264_04135 0.24 -2.2 957,849 - CA264_04135 0.24 -1.4 957,856 + CA264_04135 0.25 +0.1 957,856 + CA264_04135 0.25 +0.5 957,875 - CA264_04135 0.30 -0.7 957,949 + CA264_04135 0.48 -0.1 958,077 + CA264_04135 0.79 -1.3 958,078 - CA264_04135 0.79 +0.6 958,146 + -1.2 958,147 - -0.2 958,166 - +0.1 958,173 + +0.1 958,174 - -0.8 958,195 + -2.0 958,197 + -0.8 958,211 + -0.3 958,212 - +0.1 958,242 - -0.2 958,255 - -1.2 958,302 - +0.0 958,399 - CA264_04140 0.19 +0.6 958,497 - CA264_04140 0.30 -0.2 958,568 + CA264_04140 0.38 +0.3 958,569 - CA264_04140 0.38 +1.8 958,571 + CA264_04140 0.39 -0.1 958,670 - CA264_04140 0.50 -0.8 958,671 + CA264_04140 0.50 +0.0 958,671 + CA264_04140 0.50 +0.2 958,672 - CA264_04140 0.50 +0.8 958,685 + CA264_04140 0.51 +0.3 958,685 + CA264_04140 0.51 -0.3 958,686 - CA264_04140 0.52 +0.0 958,686 - CA264_04140 0.52 -0.6 958,738 + CA264_04140 0.57 -0.7 958,738 + CA264_04140 0.57 +2.2 958,890 + CA264_04140 0.74 +0.3 958,891 - CA264_04140 0.74 -1.0 958,892 + CA264_04140 0.75 -0.7 958,893 - CA264_04140 0.75 -1.9 958,896 + CA264_04140 0.75 -1.3 958,924 + CA264_04140 0.78 +1.4 958,925 - CA264_04140 0.78 +1.7 959,083 + -0.3 959,084 - -0.8 959,094 + +0.4 959,094 + +0.3 959,123 + +0.2 959,141 - -1.3 959,158 - +0.7 959,160 - +0.2 959,160 - -0.2
Or see this region's nucleotide sequence