Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03745 and CA264_03750 are separated by 430 nucleotides CA264_03750 and CA264_03755 are separated by 56 nucleotides
CA264_03745: CA264_03745 - pseudouridylate synthase, at 878,440 to 879,174
_03745
CA264_03750: CA264_03750 - hypothetical protein, at 879,605 to 880,579
_03750
CA264_03755: CA264_03755 - hypothetical protein, at 880,636 to 882,687
_03755
Position (kb) 879
880
881 Strain fitness (log2 ratio) -2
-1
0
1
2 at 878.605 kb on - strand, within CA264_03745 at 878.661 kb on + strand, within CA264_03745 at 878.727 kb on - strand, within CA264_03745 at 878.838 kb on + strand, within CA264_03745 at 878.838 kb on + strand, within CA264_03745 at 878.976 kb on - strand, within CA264_03745 at 878.980 kb on + strand, within CA264_03745 at 878.981 kb on - strand, within CA264_03745 at 878.994 kb on + strand, within CA264_03745 at 878.995 kb on - strand, within CA264_03745 at 878.995 kb on - strand, within CA264_03745 at 878.995 kb on - strand, within CA264_03745 at 878.995 kb on - strand, within CA264_03745 at 879.002 kb on - strand, within CA264_03745 at 879.066 kb on + strand, within CA264_03745 at 879.067 kb on - strand, within CA264_03745 at 879.103 kb on + strand at 879.121 kb on + strand at 879.122 kb on - strand at 879.126 kb on + strand at 879.141 kb on + strand at 879.142 kb on - strand at 879.144 kb on - strand at 879.144 kb on - strand at 879.147 kb on + strand at 879.147 kb on + strand at 879.150 kb on - strand at 879.155 kb on + strand at 879.156 kb on - strand at 879.217 kb on - strand at 879.230 kb on - strand at 879.230 kb on - strand at 879.230 kb on - strand at 879.238 kb on + strand at 879.239 kb on - strand at 879.245 kb on + strand at 879.246 kb on - strand at 879.246 kb on - strand at 879.246 kb on - strand at 879.305 kb on + strand at 879.305 kb on + strand at 879.305 kb on + strand at 879.342 kb on - strand at 879.369 kb on + strand at 879.374 kb on - strand at 879.376 kb on + strand at 879.377 kb on - strand at 879.377 kb on - strand at 879.377 kb on - strand at 879.377 kb on - strand at 879.380 kb on - strand at 879.381 kb on + strand at 879.489 kb on - strand at 879.517 kb on - strand at 879.539 kb on + strand at 879.582 kb on + strand at 879.582 kb on + strand at 879.583 kb on - strand at 879.583 kb on - strand at 879.603 kb on + strand at 879.606 kb on + strand at 879.617 kb on - strand at 879.627 kb on - strand at 879.656 kb on + strand at 879.657 kb on - strand at 879.659 kb on + strand at 879.660 kb on - strand at 879.660 kb on - strand at 879.669 kb on - strand at 879.739 kb on + strand, within CA264_03750 at 879.739 kb on + strand, within CA264_03750 at 879.739 kb on + strand, within CA264_03750 at 879.770 kb on - strand, within CA264_03750 at 879.770 kb on - strand, within CA264_03750 at 879.797 kb on + strand, within CA264_03750 at 879.798 kb on - strand, within CA264_03750 at 879.798 kb on - strand, within CA264_03750 at 879.798 kb on - strand, within CA264_03750 at 879.800 kb on + strand, within CA264_03750 at 879.807 kb on - strand, within CA264_03750 at 879.846 kb on + strand, within CA264_03750 at 879.933 kb on - strand, within CA264_03750 at 879.936 kb on + strand, within CA264_03750 at 879.936 kb on + strand, within CA264_03750 at 879.937 kb on - strand, within CA264_03750 at 879.937 kb on - strand, within CA264_03750 at 879.937 kb on - strand, within CA264_03750 at 879.939 kb on + strand, within CA264_03750 at 879.975 kb on + strand, within CA264_03750 at 879.975 kb on + strand, within CA264_03750 at 879.976 kb on - strand, within CA264_03750 at 879.989 kb on + strand, within CA264_03750 at 879.990 kb on - strand, within CA264_03750 at 879.990 kb on - strand, within CA264_03750 at 879.993 kb on + strand, within CA264_03750 at 880.076 kb on - strand, within CA264_03750 at 880.084 kb on + strand, within CA264_03750 at 880.091 kb on - strand, within CA264_03750 at 880.110 kb on + strand, within CA264_03750 at 880.159 kb on + strand, within CA264_03750 at 880.226 kb on + strand, within CA264_03750 at 880.227 kb on - strand, within CA264_03750 at 880.227 kb on - strand, within CA264_03750 at 880.230 kb on + strand, within CA264_03750 at 880.231 kb on - strand, within CA264_03750 at 880.231 kb on - strand, within CA264_03750 at 880.244 kb on + strand, within CA264_03750 at 880.255 kb on + strand, within CA264_03750 at 880.265 kb on - strand, within CA264_03750 at 880.324 kb on + strand, within CA264_03750 at 880.338 kb on + strand, within CA264_03750 at 880.338 kb on + strand, within CA264_03750 at 880.338 kb on + strand, within CA264_03750 at 880.360 kb on + strand, within CA264_03750 at 880.374 kb on - strand, within CA264_03750 at 880.374 kb on - strand, within CA264_03750 at 880.374 kb on - strand, within CA264_03750 at 880.381 kb on + strand, within CA264_03750 at 880.381 kb on + strand, within CA264_03750 at 880.385 kb on + strand, within CA264_03750 at 880.386 kb on - strand, within CA264_03750 at 880.386 kb on - strand, within CA264_03750 at 880.386 kb on - strand, within CA264_03750 at 880.388 kb on + strand, within CA264_03750 at 880.388 kb on + strand, within CA264_03750 at 880.388 kb on + strand, within CA264_03750 at 880.388 kb on + strand, within CA264_03750 at 880.389 kb on - strand, within CA264_03750 at 880.389 kb on - strand, within CA264_03750 at 880.389 kb on - strand, within CA264_03750 at 880.389 kb on - strand, within CA264_03750 at 880.389 kb on - strand, within CA264_03750 at 880.398 kb on - strand, within CA264_03750 at 880.410 kb on - strand, within CA264_03750 at 880.413 kb on - strand, within CA264_03750 at 880.427 kb on - strand, within CA264_03750 at 880.427 kb on - strand, within CA264_03750 at 880.436 kb on - strand, within CA264_03750 at 880.436 kb on - strand, within CA264_03750 at 880.471 kb on + strand, within CA264_03750 at 880.472 kb on - strand, within CA264_03750 at 880.481 kb on - strand, within CA264_03750 at 880.482 kb on + strand at 880.492 kb on + strand at 880.492 kb on + strand at 880.492 kb on + strand at 880.496 kb on - strand at 880.590 kb on - strand at 880.602 kb on - strand at 880.615 kb on + strand at 880.615 kb on + strand at 880.632 kb on + strand at 880.663 kb on - strand at 880.697 kb on - strand at 880.698 kb on + strand at 880.699 kb on - strand at 880.745 kb on + strand at 880.746 kb on - strand at 880.849 kb on - strand, within CA264_03755 at 880.851 kb on - strand, within CA264_03755 at 880.851 kb on - strand, within CA264_03755 at 880.855 kb on - strand, within CA264_03755 at 880.855 kb on - strand, within CA264_03755 at 880.870 kb on + strand, within CA264_03755 at 880.870 kb on + strand, within CA264_03755 at 880.870 kb on + strand, within CA264_03755 at 880.871 kb on - strand, within CA264_03755 at 880.871 kb on - strand, within CA264_03755 at 880.871 kb on - strand, within CA264_03755 at 880.871 kb on - strand, within CA264_03755 at 880.929 kb on + strand, within CA264_03755 at 880.945 kb on + strand, within CA264_03755 at 880.960 kb on + strand, within CA264_03755 at 880.960 kb on + strand, within CA264_03755 at 880.960 kb on + strand, within CA264_03755 at 880.960 kb on + strand, within CA264_03755 at 880.961 kb on - strand, within CA264_03755 at 880.961 kb on - strand, within CA264_03755 at 880.962 kb on + strand, within CA264_03755 at 880.962 kb on + strand, within CA264_03755 at 880.963 kb on - strand, within CA264_03755 at 880.967 kb on - strand, within CA264_03755 at 881.029 kb on + strand, within CA264_03755 at 881.030 kb on - strand, within CA264_03755 at 881.030 kb on - strand, within CA264_03755 at 881.030 kb on - strand, within CA264_03755 at 881.030 kb on - strand, within CA264_03755 at 881.040 kb on + strand, within CA264_03755 at 881.041 kb on - strand, within CA264_03755 at 881.041 kb on - strand, within CA264_03755 at 881.041 kb on - strand, within CA264_03755 at 881.075 kb on + strand, within CA264_03755 at 881.136 kb on + strand, within CA264_03755 at 881.199 kb on + strand, within CA264_03755 at 881.212 kb on + strand, within CA264_03755 at 881.251 kb on + strand, within CA264_03755 at 881.261 kb on - strand, within CA264_03755 at 881.270 kb on - strand, within CA264_03755 at 881.281 kb on + strand, within CA264_03755 at 881.286 kb on + strand, within CA264_03755 at 881.287 kb on - strand, within CA264_03755 at 881.287 kb on - strand, within CA264_03755 at 881.320 kb on + strand, within CA264_03755 at 881.343 kb on + strand, within CA264_03755 at 881.433 kb on + strand, within CA264_03755 at 881.433 kb on + strand, within CA264_03755 at 881.434 kb on - strand, within CA264_03755 at 881.434 kb on - strand, within CA264_03755 at 881.476 kb on - strand, within CA264_03755 at 881.496 kb on + strand, within CA264_03755 at 881.503 kb on + strand, within CA264_03755 at 881.503 kb on + strand, within CA264_03755 at 881.504 kb on - strand, within CA264_03755 at 881.525 kb on + strand, within CA264_03755 at 881.556 kb on - strand, within CA264_03755 at 881.556 kb on - strand, within CA264_03755
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 878,605 - CA264_03745 0.22 +0.3 878,661 + CA264_03745 0.30 -0.7 878,727 - CA264_03745 0.39 -0.8 878,838 + CA264_03745 0.54 +0.5 878,838 + CA264_03745 0.54 -0.4 878,976 - CA264_03745 0.73 +0.1 878,980 + CA264_03745 0.73 -0.2 878,981 - CA264_03745 0.74 -0.6 878,994 + CA264_03745 0.75 -0.0 878,995 - CA264_03745 0.76 +0.7 878,995 - CA264_03745 0.76 -1.0 878,995 - CA264_03745 0.76 -0.4 878,995 - CA264_03745 0.76 -1.2 879,002 - CA264_03745 0.76 +0.1 879,066 + CA264_03745 0.85 -1.8 879,067 - CA264_03745 0.85 -0.7 879,103 + +0.4 879,121 + -1.2 879,122 - +0.3 879,126 + -0.0 879,141 + +0.3 879,142 - -0.8 879,144 - +0.2 879,144 - +1.1 879,147 + +0.5 879,147 + +1.9 879,150 - +0.2 879,155 + +0.3 879,156 - -0.5 879,217 - -1.6 879,230 - +0.2 879,230 - -0.4 879,230 - +1.1 879,238 + -0.1 879,239 - -1.9 879,245 + -1.1 879,246 - -0.0 879,246 - +1.7 879,246 - -0.0 879,305 + +1.0 879,305 + -0.6 879,305 + +1.9 879,342 - +1.1 879,369 + +0.2 879,374 - -0.6 879,376 + +1.0 879,377 - -1.3 879,377 - -0.3 879,377 - +0.9 879,377 - -1.5 879,380 - -2.7 879,381 + +0.3 879,489 - +0.3 879,517 - -0.3 879,539 + -0.6 879,582 + +0.3 879,582 + +0.5 879,583 - +0.4 879,583 - +0.3 879,603 + -1.0 879,606 + +0.5 879,617 - +1.0 879,627 - +0.2 879,656 + -0.4 879,657 - +0.5 879,659 + -1.5 879,660 - -0.2 879,660 - -0.4 879,669 - -0.1 879,739 + CA264_03750 0.14 +0.8 879,739 + CA264_03750 0.14 +1.5 879,739 + CA264_03750 0.14 -0.3 879,770 - CA264_03750 0.17 +0.8 879,770 - CA264_03750 0.17 -0.2 879,797 + CA264_03750 0.20 +0.2 879,798 - CA264_03750 0.20 +0.7 879,798 - CA264_03750 0.20 +0.9 879,798 - CA264_03750 0.20 -0.0 879,800 + CA264_03750 0.20 +1.1 879,807 - CA264_03750 0.21 -0.3 879,846 + CA264_03750 0.25 +1.0 879,933 - CA264_03750 0.34 +0.6 879,936 + CA264_03750 0.34 +0.1 879,936 + CA264_03750 0.34 -0.1 879,937 - CA264_03750 0.34 +0.0 879,937 - CA264_03750 0.34 +0.0 879,937 - CA264_03750 0.34 -1.1 879,939 + CA264_03750 0.34 +1.1 879,975 + CA264_03750 0.38 -0.4 879,975 + CA264_03750 0.38 +0.6 879,976 - CA264_03750 0.38 +1.0 879,989 + CA264_03750 0.39 +2.3 879,990 - CA264_03750 0.39 +0.4 879,990 - CA264_03750 0.39 +1.9 879,993 + CA264_03750 0.40 -0.1 880,076 - CA264_03750 0.48 +0.8 880,084 + CA264_03750 0.49 +1.5 880,091 - CA264_03750 0.50 +0.2 880,110 + CA264_03750 0.52 -0.2 880,159 + CA264_03750 0.57 +0.1 880,226 + CA264_03750 0.64 +0.7 880,227 - CA264_03750 0.64 -1.6 880,227 - CA264_03750 0.64 +1.4 880,230 + CA264_03750 0.64 +1.4 880,231 - CA264_03750 0.64 -1.9 880,231 - CA264_03750 0.64 +0.4 880,244 + CA264_03750 0.66 -0.3 880,255 + CA264_03750 0.67 -0.2 880,265 - CA264_03750 0.68 -0.2 880,324 + CA264_03750 0.74 +0.2 880,338 + CA264_03750 0.75 -1.7 880,338 + CA264_03750 0.75 +0.6 880,338 + CA264_03750 0.75 -0.2 880,360 + CA264_03750 0.77 -0.1 880,374 - CA264_03750 0.79 -2.1 880,374 - CA264_03750 0.79 -1.8 880,374 - CA264_03750 0.79 +1.2 880,381 + CA264_03750 0.80 +0.2 880,381 + CA264_03750 0.80 -0.4 880,385 + CA264_03750 0.80 +0.3 880,386 - CA264_03750 0.80 -0.5 880,386 - CA264_03750 0.80 +1.9 880,386 - CA264_03750 0.80 -0.7 880,388 + CA264_03750 0.80 +1.0 880,388 + CA264_03750 0.80 +1.1 880,388 + CA264_03750 0.80 +0.8 880,388 + CA264_03750 0.80 -1.2 880,389 - CA264_03750 0.80 +0.2 880,389 - CA264_03750 0.80 +0.2 880,389 - CA264_03750 0.80 +0.7 880,389 - CA264_03750 0.80 +1.1 880,389 - CA264_03750 0.80 +0.2 880,398 - CA264_03750 0.81 +0.3 880,410 - CA264_03750 0.83 +0.6 880,413 - CA264_03750 0.83 -0.2 880,427 - CA264_03750 0.84 +1.6 880,427 - CA264_03750 0.84 +0.0 880,436 - CA264_03750 0.85 +0.7 880,436 - CA264_03750 0.85 +1.3 880,471 + CA264_03750 0.89 -1.1 880,472 - CA264_03750 0.89 -0.1 880,481 - CA264_03750 0.90 +0.4 880,482 + -0.1 880,492 + +0.1 880,492 + +1.3 880,492 + -0.8 880,496 - -0.1 880,590 - +1.0 880,602 - -1.0 880,615 + +0.3 880,615 + -0.2 880,632 + -0.6 880,663 - -0.0 880,697 - +0.3 880,698 + +1.1 880,699 - +0.3 880,745 + +0.0 880,746 - +1.6 880,849 - CA264_03755 0.10 -0.2 880,851 - CA264_03755 0.10 -0.5 880,851 - CA264_03755 0.10 -0.1 880,855 - CA264_03755 0.11 +0.9 880,855 - CA264_03755 0.11 -0.9 880,870 + CA264_03755 0.11 +0.1 880,870 + CA264_03755 0.11 +0.3 880,870 + CA264_03755 0.11 +0.6 880,871 - CA264_03755 0.11 -0.2 880,871 - CA264_03755 0.11 +1.1 880,871 - CA264_03755 0.11 +2.3 880,871 - CA264_03755 0.11 +0.0 880,929 + CA264_03755 0.14 -1.7 880,945 + CA264_03755 0.15 -0.9 880,960 + CA264_03755 0.16 +1.5 880,960 + CA264_03755 0.16 -2.2 880,960 + CA264_03755 0.16 +0.6 880,960 + CA264_03755 0.16 +0.1 880,961 - CA264_03755 0.16 +0.4 880,961 - CA264_03755 0.16 -0.1 880,962 + CA264_03755 0.16 +0.5 880,962 + CA264_03755 0.16 -0.2 880,963 - CA264_03755 0.16 +1.3 880,967 - CA264_03755 0.16 +0.2 881,029 + CA264_03755 0.19 +1.0 881,030 - CA264_03755 0.19 -0.9 881,030 - CA264_03755 0.19 -0.1 881,030 - CA264_03755 0.19 +1.2 881,030 - CA264_03755 0.19 -0.1 881,040 + CA264_03755 0.20 +0.4 881,041 - CA264_03755 0.20 -0.7 881,041 - CA264_03755 0.20 +0.2 881,041 - CA264_03755 0.20 +0.1 881,075 + CA264_03755 0.21 +0.1 881,136 + CA264_03755 0.24 -0.5 881,199 + CA264_03755 0.27 +0.8 881,212 + CA264_03755 0.28 +0.4 881,251 + CA264_03755 0.30 -2.7 881,261 - CA264_03755 0.30 -0.1 881,270 - CA264_03755 0.31 -0.4 881,281 + CA264_03755 0.31 +0.1 881,286 + CA264_03755 0.32 -0.8 881,287 - CA264_03755 0.32 +0.7 881,287 - CA264_03755 0.32 +0.6 881,320 + CA264_03755 0.33 +0.2 881,343 + CA264_03755 0.34 +0.9 881,433 + CA264_03755 0.39 -0.0 881,433 + CA264_03755 0.39 -0.1 881,434 - CA264_03755 0.39 -0.3 881,434 - CA264_03755 0.39 +0.4 881,476 - CA264_03755 0.41 +1.5 881,496 + CA264_03755 0.42 +0.1 881,503 + CA264_03755 0.42 -0.2 881,503 + CA264_03755 0.42 -1.1 881,504 - CA264_03755 0.42 +1.6 881,525 + CA264_03755 0.43 +0.2 881,556 - CA264_03755 0.45 -0.3 881,556 - CA264_03755 0.45 +0.3
Or see this region's nucleotide sequence