Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02505 and CA264_02510 are separated by 880 nucleotides
CA264_02505: CA264_02505 - hypothetical protein, at 581,789 to 582,454
_02505
CA264_02510: CA264_02510 - TonB-dependent receptor, at 583,335 to 585,830
_02510
Position (kb) 583
584
585
586 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 582.336 kb on + strand, within CA264_02505 at 582.337 kb on - strand, within CA264_02505 at 582.378 kb on - strand, within CA264_02505 at 582.454 kb on + strand at 582.482 kb on - strand at 582.485 kb on + strand at 582.485 kb on + strand at 582.485 kb on + strand at 582.486 kb on - strand at 582.507 kb on - strand at 582.517 kb on - strand at 582.517 kb on - strand at 582.531 kb on + strand at 582.532 kb on - strand at 582.532 kb on - strand at 582.534 kb on + strand at 582.534 kb on + strand at 582.535 kb on - strand at 582.556 kb on - strand at 582.565 kb on - strand at 582.615 kb on + strand at 582.658 kb on - strand at 582.658 kb on - strand at 582.768 kb on - strand at 582.798 kb on + strand at 582.801 kb on - strand at 582.838 kb on + strand at 582.847 kb on - strand at 582.916 kb on - strand at 582.970 kb on - strand at 583.141 kb on - strand at 583.141 kb on - strand at 583.160 kb on + strand at 583.160 kb on + strand at 583.161 kb on - strand at 583.162 kb on + strand at 583.163 kb on - strand at 583.163 kb on - strand at 583.166 kb on + strand at 583.261 kb on - strand at 583.308 kb on + strand at 583.312 kb on + strand at 583.312 kb on + strand at 583.318 kb on + strand at 583.319 kb on - strand at 583.322 kb on + strand at 583.322 kb on + strand at 583.323 kb on - strand at 583.475 kb on - strand at 583.475 kb on - strand at 583.488 kb on + strand at 583.563 kb on + strand at 583.614 kb on - strand, within CA264_02510 at 583.614 kb on - strand, within CA264_02510 at 583.689 kb on + strand, within CA264_02510 at 583.690 kb on - strand, within CA264_02510 at 583.751 kb on + strand, within CA264_02510 at 583.751 kb on + strand, within CA264_02510 at 583.753 kb on + strand, within CA264_02510 at 583.754 kb on - strand, within CA264_02510 at 583.778 kb on - strand, within CA264_02510 at 583.778 kb on - strand, within CA264_02510 at 583.780 kb on + strand, within CA264_02510 at 583.780 kb on + strand, within CA264_02510 at 583.781 kb on - strand, within CA264_02510 at 583.781 kb on - strand, within CA264_02510 at 583.815 kb on + strand, within CA264_02510 at 583.946 kb on - strand, within CA264_02510 at 583.946 kb on - strand, within CA264_02510 at 583.946 kb on - strand, within CA264_02510 at 583.987 kb on + strand, within CA264_02510 at 583.999 kb on + strand, within CA264_02510 at 584.041 kb on - strand, within CA264_02510 at 584.043 kb on + strand, within CA264_02510 at 584.044 kb on - strand, within CA264_02510 at 584.044 kb on - strand, within CA264_02510 at 584.044 kb on - strand, within CA264_02510 at 584.105 kb on + strand, within CA264_02510 at 584.153 kb on - strand, within CA264_02510 at 584.164 kb on - strand, within CA264_02510 at 584.180 kb on + strand, within CA264_02510 at 584.181 kb on - strand, within CA264_02510 at 584.185 kb on + strand, within CA264_02510 at 584.185 kb on + strand, within CA264_02510 at 584.186 kb on - strand, within CA264_02510 at 584.186 kb on - strand, within CA264_02510 at 584.186 kb on - strand, within CA264_02510 at 584.186 kb on - strand, within CA264_02510 at 584.189 kb on + strand, within CA264_02510 at 584.216 kb on + strand, within CA264_02510 at 584.216 kb on + strand, within CA264_02510 at 584.217 kb on - strand, within CA264_02510 at 584.239 kb on + strand, within CA264_02510 at 584.240 kb on - strand, within CA264_02510 at 584.240 kb on - strand, within CA264_02510 at 584.269 kb on - strand, within CA264_02510 at 584.280 kb on + strand, within CA264_02510 at 584.294 kb on - strand, within CA264_02510 at 584.294 kb on - strand, within CA264_02510 at 584.298 kb on + strand, within CA264_02510 at 584.298 kb on + strand, within CA264_02510 at 584.299 kb on - strand, within CA264_02510 at 584.299 kb on - strand, within CA264_02510 at 584.302 kb on + strand, within CA264_02510 at 584.302 kb on + strand, within CA264_02510 at 584.303 kb on - strand, within CA264_02510 at 584.368 kb on - strand, within CA264_02510 at 584.368 kb on - strand, within CA264_02510 at 584.422 kb on - strand, within CA264_02510 at 584.422 kb on - strand, within CA264_02510 at 584.458 kb on + strand, within CA264_02510 at 584.458 kb on + strand, within CA264_02510 at 584.512 kb on - strand, within CA264_02510 at 584.515 kb on + strand, within CA264_02510 at 584.516 kb on - strand, within CA264_02510 at 584.551 kb on + strand, within CA264_02510 at 584.644 kb on - strand, within CA264_02510 at 584.687 kb on + strand, within CA264_02510 at 584.687 kb on + strand, within CA264_02510 at 584.688 kb on - strand, within CA264_02510 at 584.688 kb on - strand, within CA264_02510 at 584.689 kb on + strand, within CA264_02510 at 584.754 kb on - strand, within CA264_02510 at 585.032 kb on + strand, within CA264_02510 at 585.033 kb on - strand, within CA264_02510 at 585.051 kb on + strand, within CA264_02510 at 585.096 kb on - strand, within CA264_02510 at 585.141 kb on + strand, within CA264_02510 at 585.141 kb on + strand, within CA264_02510 at 585.142 kb on - strand, within CA264_02510 at 585.147 kb on + strand, within CA264_02510 at 585.209 kb on + strand, within CA264_02510 at 585.210 kb on - strand, within CA264_02510 at 585.210 kb on - strand, within CA264_02510 at 585.264 kb on + strand, within CA264_02510 at 585.338 kb on + strand, within CA264_02510 at 585.359 kb on - strand, within CA264_02510 at 585.359 kb on - strand, within CA264_02510 at 585.405 kb on - strand, within CA264_02510 at 585.457 kb on - strand, within CA264_02510 at 585.462 kb on + strand, within CA264_02510 at 585.498 kb on + strand, within CA264_02510 at 585.540 kb on - strand, within CA264_02510 at 585.542 kb on - strand, within CA264_02510 at 585.564 kb on + strand, within CA264_02510 at 585.564 kb on + strand, within CA264_02510 at 585.569 kb on + strand, within CA264_02510 at 585.582 kb on - strand at 585.603 kb on + strand at 585.603 kb on + strand at 585.604 kb on - strand at 585.654 kb on - strand at 585.695 kb on + strand at 585.780 kb on + strand at 585.792 kb on - strand at 585.796 kb on - strand at 585.810 kb on + strand at 585.810 kb on + strand at 585.811 kb on - strand at 585.811 kb on - strand at 585.830 kb on + strand at 585.831 kb on - strand at 585.831 kb on - strand at 585.840 kb on + strand at 585.866 kb on + strand at 585.866 kb on + strand at 585.868 kb on + strand at 585.913 kb on - strand at 585.953 kb on - strand at 585.975 kb on + strand at 585.981 kb on + strand at 585.981 kb on + strand at 585.981 kb on + strand at 585.982 kb on - strand at 585.982 kb on - strand at 586.000 kb on - strand at 586.132 kb on - strand at 586.179 kb on + strand at 586.180 kb on - strand at 586.195 kb on - strand at 586.312 kb on + strand at 586.342 kb on + strand at 586.365 kb on - strand at 586.365 kb on - strand at 586.475 kb on + strand at 586.475 kb on + strand at 586.548 kb on - strand at 586.587 kb on - strand at 586.587 kb on - strand at 586.587 kb on - strand at 586.590 kb on - strand at 586.590 kb on - strand at 586.590 kb on - strand at 586.607 kb on + strand at 586.607 kb on + strand at 586.608 kb on - strand at 586.608 kb on - strand at 586.649 kb on + strand at 586.670 kb on + strand at 586.671 kb on - strand at 586.701 kb on - strand at 586.742 kb on - strand at 586.747 kb on + strand at 586.747 kb on + strand at 586.747 kb on + strand at 586.747 kb on + strand at 586.748 kb on - strand at 586.748 kb on - strand at 586.748 kb on - strand at 586.748 kb on - strand at 586.749 kb on + strand at 586.749 kb on + strand at 586.750 kb on - strand at 586.776 kb on - strand at 586.797 kb on + strand at 586.798 kb on - strand at 586.802 kb on + strand at 586.803 kb on - strand at 586.803 kb on - strand at 586.803 kb on - strand at 586.807 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 582,336 + CA264_02505 0.82 -0.0 582,337 - CA264_02505 0.82 +0.8 582,378 - CA264_02505 0.88 -0.2 582,454 + -1.2 582,482 - +0.3 582,485 + +1.8 582,485 + +0.2 582,485 + -0.4 582,486 - +0.4 582,507 - -2.0 582,517 - +0.2 582,517 - -0.8 582,531 + +0.3 582,532 - +0.1 582,532 - +1.5 582,534 + -0.2 582,534 + +0.7 582,535 - -0.9 582,556 - -0.8 582,565 - -0.4 582,615 + -2.1 582,658 - +0.5 582,658 - -0.5 582,768 - +0.3 582,798 + +0.1 582,801 - -0.2 582,838 + -0.7 582,847 - -0.2 582,916 - -2.5 582,970 - -0.3 583,141 - +0.3 583,141 - -0.6 583,160 + +0.2 583,160 + +0.3 583,161 - +0.6 583,162 + -0.1 583,163 - -0.3 583,163 - -0.8 583,166 + -0.8 583,261 - -0.6 583,308 + +0.7 583,312 + -0.6 583,312 + -0.0 583,318 + -0.7 583,319 - -0.5 583,322 + -0.4 583,322 + -0.2 583,323 - -2.4 583,475 - +0.4 583,475 - -1.0 583,488 + -0.4 583,563 + -0.9 583,614 - CA264_02510 0.11 -1.5 583,614 - CA264_02510 0.11 +0.5 583,689 + CA264_02510 0.14 -0.4 583,690 - CA264_02510 0.14 -0.2 583,751 + CA264_02510 0.17 +2.1 583,751 + CA264_02510 0.17 -1.4 583,753 + CA264_02510 0.17 +0.5 583,754 - CA264_02510 0.17 +0.2 583,778 - CA264_02510 0.18 -0.2 583,778 - CA264_02510 0.18 -0.2 583,780 + CA264_02510 0.18 -0.6 583,780 + CA264_02510 0.18 -0.4 583,781 - CA264_02510 0.18 -0.6 583,781 - CA264_02510 0.18 +0.4 583,815 + CA264_02510 0.19 +0.9 583,946 - CA264_02510 0.24 -0.1 583,946 - CA264_02510 0.24 -1.5 583,946 - CA264_02510 0.24 -0.1 583,987 + CA264_02510 0.26 -0.6 583,999 + CA264_02510 0.27 -0.2 584,041 - CA264_02510 0.28 -1.5 584,043 + CA264_02510 0.28 -1.4 584,044 - CA264_02510 0.28 -0.8 584,044 - CA264_02510 0.28 -0.2 584,044 - CA264_02510 0.28 -0.2 584,105 + CA264_02510 0.31 +0.6 584,153 - CA264_02510 0.33 -2.0 584,164 - CA264_02510 0.33 -3.1 584,180 + CA264_02510 0.34 -1.6 584,181 - CA264_02510 0.34 +1.2 584,185 + CA264_02510 0.34 +0.5 584,185 + CA264_02510 0.34 +0.2 584,186 - CA264_02510 0.34 +0.3 584,186 - CA264_02510 0.34 +0.2 584,186 - CA264_02510 0.34 -1.0 584,186 - CA264_02510 0.34 -0.2 584,189 + CA264_02510 0.34 +0.4 584,216 + CA264_02510 0.35 -0.3 584,216 + CA264_02510 0.35 -0.3 584,217 - CA264_02510 0.35 -1.2 584,239 + CA264_02510 0.36 -1.2 584,240 - CA264_02510 0.36 +0.6 584,240 - CA264_02510 0.36 +0.5 584,269 - CA264_02510 0.37 +1.8 584,280 + CA264_02510 0.38 +0.3 584,294 - CA264_02510 0.38 +0.8 584,294 - CA264_02510 0.38 -0.3 584,298 + CA264_02510 0.39 +0.2 584,298 + CA264_02510 0.39 -1.7 584,299 - CA264_02510 0.39 -0.3 584,299 - CA264_02510 0.39 -0.8 584,302 + CA264_02510 0.39 -1.2 584,302 + CA264_02510 0.39 -0.7 584,303 - CA264_02510 0.39 -0.9 584,368 - CA264_02510 0.41 +0.8 584,368 - CA264_02510 0.41 -2.2 584,422 - CA264_02510 0.44 -2.2 584,422 - CA264_02510 0.44 -1.7 584,458 + CA264_02510 0.45 -1.5 584,458 + CA264_02510 0.45 +0.1 584,512 - CA264_02510 0.47 -0.2 584,515 + CA264_02510 0.47 -1.2 584,516 - CA264_02510 0.47 -1.4 584,551 + CA264_02510 0.49 -1.6 584,644 - CA264_02510 0.52 +0.5 584,687 + CA264_02510 0.54 -1.9 584,687 + CA264_02510 0.54 -0.6 584,688 - CA264_02510 0.54 -1.1 584,688 - CA264_02510 0.54 +1.0 584,689 + CA264_02510 0.54 -0.3 584,754 - CA264_02510 0.57 -0.4 585,032 + CA264_02510 0.68 -1.5 585,033 - CA264_02510 0.68 -0.1 585,051 + CA264_02510 0.69 -0.4 585,096 - CA264_02510 0.71 -0.2 585,141 + CA264_02510 0.72 -0.1 585,141 + CA264_02510 0.72 -1.6 585,142 - CA264_02510 0.72 -0.4 585,147 + CA264_02510 0.73 -0.6 585,209 + CA264_02510 0.75 -1.8 585,210 - CA264_02510 0.75 -0.2 585,210 - CA264_02510 0.75 +0.5 585,264 + CA264_02510 0.77 -0.7 585,338 + CA264_02510 0.80 -1.6 585,359 - CA264_02510 0.81 -0.8 585,359 - CA264_02510 0.81 -0.4 585,405 - CA264_02510 0.83 -2.0 585,457 - CA264_02510 0.85 -1.0 585,462 + CA264_02510 0.85 -0.4 585,498 + CA264_02510 0.87 -1.5 585,540 - CA264_02510 0.88 -0.8 585,542 - CA264_02510 0.88 -1.5 585,564 + CA264_02510 0.89 -0.2 585,564 + CA264_02510 0.89 -0.8 585,569 + CA264_02510 0.90 -0.2 585,582 - -0.5 585,603 + -0.3 585,603 + -0.8 585,604 - -1.2 585,654 - -0.8 585,695 + -1.2 585,780 + -0.5 585,792 - -1.3 585,796 - +0.4 585,810 + -1.5 585,810 + -0.7 585,811 - +0.8 585,811 - -1.3 585,830 + +1.1 585,831 - -0.1 585,831 - -0.3 585,840 + -1.4 585,866 + +0.0 585,866 + +1.0 585,868 + -0.1 585,913 - +2.4 585,953 - +1.7 585,975 + +0.9 585,981 + +1.6 585,981 + -2.1 585,981 + +2.4 585,982 - +0.8 585,982 - +0.0 586,000 - +0.4 586,132 - +0.2 586,179 + -0.0 586,180 - +0.4 586,195 - +1.5 586,312 + -0.3 586,342 + -1.1 586,365 - -1.5 586,365 - -0.3 586,475 + -0.9 586,475 + -1.1 586,548 - +1.4 586,587 - +0.5 586,587 - +0.6 586,587 - -0.4 586,590 - -0.1 586,590 - -0.1 586,590 - +0.3 586,607 + +0.1 586,607 + -2.0 586,608 - -1.2 586,608 - +0.4 586,649 + -0.5 586,670 + -0.3 586,671 - -1.3 586,701 - +1.5 586,742 - +0.1 586,747 + -0.9 586,747 + -0.3 586,747 + -1.7 586,747 + -0.7 586,748 - +1.4 586,748 - +0.0 586,748 - -1.1 586,748 - +0.1 586,749 + -2.4 586,749 + -0.6 586,750 - -0.1 586,776 - -0.0 586,797 + -0.1 586,798 - -0.4 586,802 + -2.3 586,803 - -0.2 586,803 - -0.1 586,803 - -0.6 586,807 + +0.2
Or see this region's nucleotide sequence