Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02445 and CA264_02450 are separated by 158 nucleotides CA264_02450 and CA264_02455 are separated by 65 nucleotides CA264_02455 and CA264_02460 overlap by 91 nucleotides CA264_02460 and CA264_02465 overlap by 4 nucleotides
CA264_02445: CA264_02445 - trehalase-like protein, at 570,579 to 571,853
_02445
CA264_02450: CA264_02450 - hypothetical protein, at 572,012 to 572,236
_02450
CA264_02455: CA264_02455 - hypothetical protein, at 572,302 to 572,970
_02455
CA264_02460: CA264_02460 - sugar dehydrogenase, at 572,880 to 573,689
_02460
CA264_02465: CA264_02465 - hypothetical protein, at 573,686 to 573,901
_02465
Position (kb) 572
573 Strain fitness (log2 ratio) -2
-1
0
1
2 at 571.341 kb on + strand, within CA264_02445 at 571.383 kb on + strand, within CA264_02445 at 571.389 kb on + strand, within CA264_02445 at 571.389 kb on + strand, within CA264_02445 at 571.390 kb on - strand, within CA264_02445 at 571.390 kb on - strand, within CA264_02445 at 571.390 kb on - strand, within CA264_02445 at 571.390 kb on - strand, within CA264_02445 at 571.413 kb on + strand, within CA264_02445 at 571.464 kb on - strand, within CA264_02445 at 571.600 kb on - strand, within CA264_02445 at 571.649 kb on + strand, within CA264_02445 at 571.658 kb on + strand, within CA264_02445 at 571.658 kb on + strand, within CA264_02445 at 571.658 kb on + strand, within CA264_02445 at 571.721 kb on + strand, within CA264_02445 at 571.722 kb on - strand, within CA264_02445 at 571.722 kb on - strand, within CA264_02445 at 571.758 kb on + strand at 571.758 kb on + strand at 571.759 kb on - strand at 571.759 kb on - strand at 571.759 kb on - strand at 571.770 kb on - strand at 571.851 kb on + strand at 571.919 kb on + strand at 571.920 kb on - strand at 571.930 kb on - strand at 571.940 kb on - strand at 571.940 kb on - strand at 571.940 kb on - strand at 571.977 kb on + strand at 572.053 kb on - strand, within CA264_02450 at 572.053 kb on - strand, within CA264_02450 at 572.053 kb on - strand, within CA264_02450 at 572.056 kb on - strand, within CA264_02450 at 572.071 kb on + strand, within CA264_02450 at 572.071 kb on + strand, within CA264_02450 at 572.076 kb on + strand, within CA264_02450 at 572.078 kb on + strand, within CA264_02450 at 572.102 kb on + strand, within CA264_02450 at 572.199 kb on + strand at 572.219 kb on + strand at 572.219 kb on + strand at 572.222 kb on + strand at 572.222 kb on + strand at 572.246 kb on - strand at 572.248 kb on - strand at 572.259 kb on - strand at 572.263 kb on - strand at 572.321 kb on + strand at 572.321 kb on + strand at 572.321 kb on + strand at 572.321 kb on + strand at 572.322 kb on - strand at 572.367 kb on + strand at 572.408 kb on + strand, within CA264_02455 at 572.409 kb on - strand, within CA264_02455 at 572.422 kb on - strand, within CA264_02455 at 572.499 kb on + strand, within CA264_02455 at 572.535 kb on - strand, within CA264_02455 at 572.535 kb on - strand, within CA264_02455 at 572.592 kb on + strand, within CA264_02455 at 572.614 kb on - strand, within CA264_02455 at 572.617 kb on + strand, within CA264_02455 at 572.618 kb on - strand, within CA264_02455 at 572.618 kb on - strand, within CA264_02455 at 572.618 kb on - strand, within CA264_02455 at 572.632 kb on - strand, within CA264_02455 at 572.632 kb on - strand, within CA264_02455 at 572.642 kb on - strand, within CA264_02455 at 572.723 kb on - strand, within CA264_02455 at 572.723 kb on - strand, within CA264_02455 at 572.739 kb on + strand, within CA264_02455 at 572.739 kb on + strand, within CA264_02455 at 572.740 kb on - strand, within CA264_02455 at 572.746 kb on - strand, within CA264_02455 at 572.770 kb on + strand, within CA264_02455 at 572.833 kb on + strand, within CA264_02455 at 572.855 kb on - strand, within CA264_02455 at 572.882 kb on - strand at 572.923 kb on + strand at 572.924 kb on - strand at 572.940 kb on + strand at 572.945 kb on - strand at 572.945 kb on - strand at 572.945 kb on - strand at 572.976 kb on + strand, within CA264_02460 at 573.086 kb on + strand, within CA264_02460 at 573.407 kb on + strand, within CA264_02460 at 573.450 kb on + strand, within CA264_02460 at 573.451 kb on - strand, within CA264_02460 at 573.565 kb on + strand, within CA264_02460 at 573.682 kb on + strand at 573.783 kb on + strand, within CA264_02465 at 573.784 kb on - strand, within CA264_02465 at 573.784 kb on - strand, within CA264_02465 at 573.876 kb on - strand, within CA264_02465 at 573.881 kb on - strand at 573.896 kb on + strand at 573.923 kb on + strand at 573.924 kb on - strand at 573.939 kb on + strand at 573.939 kb on + strand at 573.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 571,341 + CA264_02445 0.60 +0.3 571,383 + CA264_02445 0.63 -0.5 571,389 + CA264_02445 0.64 -0.4 571,389 + CA264_02445 0.64 +0.0 571,390 - CA264_02445 0.64 -0.7 571,390 - CA264_02445 0.64 -0.7 571,390 - CA264_02445 0.64 -0.4 571,390 - CA264_02445 0.64 +0.4 571,413 + CA264_02445 0.65 +0.9 571,464 - CA264_02445 0.69 -0.5 571,600 - CA264_02445 0.80 +0.6 571,649 + CA264_02445 0.84 -1.6 571,658 + CA264_02445 0.85 -1.0 571,658 + CA264_02445 0.85 -0.0 571,658 + CA264_02445 0.85 +2.0 571,721 + CA264_02445 0.90 +0.3 571,722 - CA264_02445 0.90 -1.6 571,722 - CA264_02445 0.90 -0.2 571,758 + -1.2 571,758 + +0.3 571,759 - +0.3 571,759 - -0.0 571,759 - +0.1 571,770 - +0.3 571,851 + +0.7 571,919 + -0.6 571,920 - -0.3 571,930 - -0.4 571,940 - +0.4 571,940 - -0.4 571,940 - -0.1 571,977 + +0.8 572,053 - CA264_02450 0.18 +0.2 572,053 - CA264_02450 0.18 -1.5 572,053 - CA264_02450 0.18 -1.3 572,056 - CA264_02450 0.20 -0.4 572,071 + CA264_02450 0.26 +1.2 572,071 + CA264_02450 0.26 -0.2 572,076 + CA264_02450 0.28 -1.2 572,078 + CA264_02450 0.29 +2.6 572,102 + CA264_02450 0.40 -0.5 572,199 + +1.4 572,219 + -0.4 572,219 + -0.6 572,222 + +0.4 572,222 + +0.8 572,246 - +0.6 572,248 - +1.0 572,259 - -1.9 572,263 - -0.1 572,321 + -1.2 572,321 + +0.5 572,321 + -1.1 572,321 + +0.7 572,322 - -0.2 572,367 + -0.6 572,408 + CA264_02455 0.16 +0.6 572,409 - CA264_02455 0.16 +0.6 572,422 - CA264_02455 0.18 +0.5 572,499 + CA264_02455 0.29 -1.2 572,535 - CA264_02455 0.35 -0.4 572,535 - CA264_02455 0.35 -0.3 572,592 + CA264_02455 0.43 +0.6 572,614 - CA264_02455 0.47 -0.4 572,617 + CA264_02455 0.47 +0.5 572,618 - CA264_02455 0.47 -0.8 572,618 - CA264_02455 0.47 -0.3 572,618 - CA264_02455 0.47 +0.8 572,632 - CA264_02455 0.49 -1.3 572,632 - CA264_02455 0.49 -0.8 572,642 - CA264_02455 0.51 +0.1 572,723 - CA264_02455 0.63 -0.1 572,723 - CA264_02455 0.63 +0.1 572,739 + CA264_02455 0.65 +0.3 572,739 + CA264_02455 0.65 -1.0 572,740 - CA264_02455 0.65 -0.7 572,746 - CA264_02455 0.66 +0.3 572,770 + CA264_02455 0.70 -1.4 572,833 + CA264_02455 0.79 -0.2 572,855 - CA264_02455 0.83 -0.2 572,882 - -0.7 572,923 + -1.2 572,924 - -0.2 572,940 + -0.2 572,945 - -0.2 572,945 - +0.3 572,945 - -0.4 572,976 + CA264_02460 0.12 -2.6 573,086 + CA264_02460 0.25 -0.3 573,407 + CA264_02460 0.65 -0.9 573,450 + CA264_02460 0.70 +0.2 573,451 - CA264_02460 0.70 +0.4 573,565 + CA264_02460 0.85 +0.2 573,682 + -0.0 573,783 + CA264_02465 0.45 +0.6 573,784 - CA264_02465 0.45 -0.1 573,784 - CA264_02465 0.45 +0.4 573,876 - CA264_02465 0.88 +0.8 573,881 - +0.3 573,896 + +0.3 573,923 + +0.8 573,924 - +0.4 573,939 + -0.5 573,939 + +0.3 573,966 - -0.4
Or see this region's nucleotide sequence