Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01490 and CA264_01495 are separated by 3 nucleotides CA264_01495 and CA264_01500 overlap by 1 nucleotides CA264_01500 and CA264_01505 are separated by 107 nucleotides CA264_01505 and CA264_01510 are separated by 46 nucleotides
CA264_01490: CA264_01490 - DUF4199 domain-containing protein, at 353,509 to 354,027
_01490
CA264_01495: CA264_01495 - glycosyltransferase, at 354,031 to 355,005
_01495
CA264_01500: CA264_01500 - glycosyl transferase family 1, at 355,005 to 356,153
_01500
CA264_01505: CA264_01505 - hypothetical protein, at 356,261 to 356,800
_01505
CA264_01510: CA264_01510 - hypothetical protein, at 356,847 to 357,368
_01510
Position (kb) 355
356
357 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 356.147 kb on + strand at 356.147 kb on + strand at 356.159 kb on - strand at 356.161 kb on - strand at 356.193 kb on - strand at 356.208 kb on - strand at 356.233 kb on + strand at 356.234 kb on - strand at 356.274 kb on + strand at 356.274 kb on + strand at 356.275 kb on - strand at 356.277 kb on + strand at 356.278 kb on - strand at 356.280 kb on + strand at 356.292 kb on - strand at 356.399 kb on - strand, within CA264_01505 at 356.399 kb on - strand, within CA264_01505 at 356.405 kb on - strand, within CA264_01505 at 356.409 kb on - strand, within CA264_01505 at 356.656 kb on + strand, within CA264_01505 at 356.786 kb on + strand at 356.786 kb on + strand at 356.786 kb on + strand at 356.787 kb on - strand at 356.825 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.933 kb on - strand, within CA264_01510 at 356.985 kb on + strand, within CA264_01510 at 356.986 kb on - strand, within CA264_01510 at 357.054 kb on + strand, within CA264_01510 at 357.080 kb on - strand, within CA264_01510 at 357.084 kb on - strand, within CA264_01510 at 357.084 kb on - strand, within CA264_01510
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 356,147 + +0.4 356,147 + -2.3 356,159 - -1.3 356,161 - -1.0 356,193 - -1.0 356,208 - -0.2 356,233 + -0.2 356,234 - +0.1 356,274 + -1.1 356,274 + -0.5 356,275 - -0.6 356,277 + -0.5 356,278 - +0.2 356,280 + -0.3 356,292 - -0.7 356,399 - CA264_01505 0.26 +1.5 356,399 - CA264_01505 0.26 -0.4 356,405 - CA264_01505 0.27 +1.7 356,409 - CA264_01505 0.27 -1.0 356,656 + CA264_01505 0.73 +3.2 356,786 + -0.3 356,786 + -0.2 356,786 + +0.9 356,787 - -0.8 356,825 + -0.9 356,827 + -0.3 356,827 + -0.0 356,827 + -1.1 356,827 + -0.2 356,933 - CA264_01510 0.16 -0.5 356,985 + CA264_01510 0.26 -1.5 356,986 - CA264_01510 0.27 -0.1 357,054 + CA264_01510 0.40 +0.2 357,080 - CA264_01510 0.45 -0.1 357,084 - CA264_01510 0.45 +0.7 357,084 - CA264_01510 0.45 -0.7
Or see this region's nucleotide sequence