Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_01245

Experiment: m.b. Vancomycin 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_01240 and CA264_01245 are separated by 238 nucleotidesCA264_01245 and CA264_01250 are separated by 125 nucleotides CA264_01240: CA264_01240 - Tellurite resistance protein, at 294,343 to 295,110 _01240 CA264_01245: CA264_01245 - serine hydrolase, at 295,349 to 296,530 _01245 CA264_01250: CA264_01250 - amidohydrolase, at 296,656 to 299,955 _01250 Position (kb) 295 296 297Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 294.469 kb on + strand, within CA264_01240at 294.469 kb on + strand, within CA264_01240at 294.612 kb on + strand, within CA264_01240at 294.613 kb on - strand, within CA264_01240at 294.643 kb on + strand, within CA264_01240at 294.643 kb on + strand, within CA264_01240at 294.643 kb on + strand, within CA264_01240at 294.644 kb on - strand, within CA264_01240at 294.689 kb on + strand, within CA264_01240at 294.710 kb on - strand, within CA264_01240at 294.710 kb on - strand, within CA264_01240at 294.714 kb on + strand, within CA264_01240at 294.714 kb on + strand, within CA264_01240at 294.714 kb on + strand, within CA264_01240at 294.715 kb on - strand, within CA264_01240at 294.716 kb on + strand, within CA264_01240at 294.731 kb on + strand, within CA264_01240at 294.731 kb on + strand, within CA264_01240at 294.731 kb on + strand, within CA264_01240at 294.732 kb on - strand, within CA264_01240at 294.732 kb on - strand, within CA264_01240at 294.732 kb on - strand, within CA264_01240at 294.787 kb on - strand, within CA264_01240at 294.816 kb on + strand, within CA264_01240at 294.816 kb on + strand, within CA264_01240at 294.828 kb on + strand, within CA264_01240at 294.831 kb on - strand, within CA264_01240at 294.845 kb on + strand, within CA264_01240at 294.852 kb on + strand, within CA264_01240at 294.852 kb on + strand, within CA264_01240at 294.852 kb on + strand, within CA264_01240at 294.853 kb on - strand, within CA264_01240at 294.853 kb on - strand, within CA264_01240at 294.858 kb on - strand, within CA264_01240at 294.955 kb on - strand, within CA264_01240at 294.959 kb on - strand, within CA264_01240at 294.959 kb on - strand, within CA264_01240at 294.959 kb on - strand, within CA264_01240at 294.996 kb on - strand, within CA264_01240at 295.059 kb on - strandat 295.108 kb on + strandat 295.116 kb on - strandat 295.178 kb on + strandat 295.179 kb on - strandat 295.179 kb on - strandat 295.201 kb on + strandat 295.217 kb on + strandat 295.221 kb on - strandat 295.260 kb on + strandat 295.263 kb on - strandat 295.292 kb on + strandat 295.292 kb on + strandat 295.329 kb on + strandat 295.364 kb on + strandat 295.431 kb on + strandat 295.457 kb on + strandat 295.457 kb on + strandat 295.460 kb on + strandat 295.460 kb on + strandat 295.461 kb on - strandat 295.461 kb on - strandat 295.461 kb on - strandat 295.542 kb on + strand, within CA264_01245at 295.543 kb on - strand, within CA264_01245at 295.677 kb on - strand, within CA264_01245at 295.677 kb on - strand, within CA264_01245at 295.677 kb on - strand, within CA264_01245at 295.684 kb on - strand, within CA264_01245at 295.721 kb on + strand, within CA264_01245at 295.721 kb on + strand, within CA264_01245at 295.721 kb on + strand, within CA264_01245at 295.722 kb on - strand, within CA264_01245at 295.753 kb on - strand, within CA264_01245at 295.811 kb on + strand, within CA264_01245at 295.812 kb on - strand, within CA264_01245at 295.812 kb on - strand, within CA264_01245at 295.843 kb on + strand, within CA264_01245at 295.855 kb on + strand, within CA264_01245at 295.926 kb on + strand, within CA264_01245at 295.930 kb on + strand, within CA264_01245at 295.971 kb on + strand, within CA264_01245at 295.971 kb on + strand, within CA264_01245at 296.342 kb on + strand, within CA264_01245at 296.390 kb on - strand, within CA264_01245at 296.400 kb on - strand, within CA264_01245at 296.452 kb on + strandat 296.453 kb on - strandat 296.454 kb on + strandat 296.454 kb on + strandat 296.454 kb on + strandat 296.455 kb on - strandat 296.455 kb on - strandat 296.459 kb on - strandat 296.459 kb on - strandat 296.460 kb on + strandat 296.460 kb on + strandat 296.461 kb on - strandat 296.520 kb on + strandat 296.520 kb on + strandat 296.564 kb on + strandat 296.588 kb on - strandat 296.639 kb on + strandat 296.646 kb on + strandat 296.738 kb on + strandat 296.738 kb on + strandat 296.738 kb on + strandat 296.739 kb on - strandat 296.739 kb on - strandat 296.739 kb on - strandat 296.775 kb on + strandat 296.780 kb on + strandat 296.780 kb on + strandat 296.788 kb on + strandat 296.837 kb on + strandat 296.838 kb on - strandat 296.949 kb on - strandat 296.977 kb on + strandat 296.978 kb on - strandat 297.183 kb on + strand, within CA264_01250at 297.196 kb on - strand, within CA264_01250at 297.245 kb on + strand, within CA264_01250at 297.246 kb on + strand, within CA264_01250at 297.248 kb on + strand, within CA264_01250at 297.270 kb on - strand, within CA264_01250at 297.286 kb on - strand, within CA264_01250at 297.336 kb on - strand, within CA264_01250at 297.337 kb on + strand, within CA264_01250at 297.352 kb on + strand, within CA264_01250at 297.385 kb on + strand, within CA264_01250at 297.498 kb on - strand, within CA264_01250

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml
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294,469 + CA264_01240 0.16 +1.0
294,469 + CA264_01240 0.16 -0.7
294,612 + CA264_01240 0.35 -1.0
294,613 - CA264_01240 0.35 +0.5
294,643 + CA264_01240 0.39 +1.3
294,643 + CA264_01240 0.39 -1.1
294,643 + CA264_01240 0.39 +0.8
294,644 - CA264_01240 0.39 +0.0
294,689 + CA264_01240 0.45 -1.2
294,710 - CA264_01240 0.48 +0.6
294,710 - CA264_01240 0.48 +1.4
294,714 + CA264_01240 0.48 +0.4
294,714 + CA264_01240 0.48 -1.3
294,714 + CA264_01240 0.48 -0.8
294,715 - CA264_01240 0.48 -0.2
294,716 + CA264_01240 0.49 -1.2
294,731 + CA264_01240 0.51 -2.3
294,731 + CA264_01240 0.51 -0.1
294,731 + CA264_01240 0.51 -1.2
294,732 - CA264_01240 0.51 +0.4
294,732 - CA264_01240 0.51 +0.5
294,732 - CA264_01240 0.51 -1.3
294,787 - CA264_01240 0.58 -0.3
294,816 + CA264_01240 0.62 -0.8
294,816 + CA264_01240 0.62 +0.3
294,828 + CA264_01240 0.63 +1.4
294,831 - CA264_01240 0.64 -0.1
294,845 + CA264_01240 0.65 -0.1
294,852 + CA264_01240 0.66 +0.2
294,852 + CA264_01240 0.66 -0.3
294,852 + CA264_01240 0.66 +0.6
294,853 - CA264_01240 0.66 +0.4
294,853 - CA264_01240 0.66 -0.2
294,858 - CA264_01240 0.67 -0.6
294,955 - CA264_01240 0.80 -0.0
294,959 - CA264_01240 0.80 +0.4
294,959 - CA264_01240 0.80 -0.3
294,959 - CA264_01240 0.80 -0.8
294,996 - CA264_01240 0.85 +0.3
295,059 - +0.1
295,108 + +1.5
295,116 - -0.6
295,178 + +0.1
295,179 - +0.5
295,179 - -0.3
295,201 + -0.1
295,217 + -1.3
295,221 - -0.2
295,260 + -1.8
295,263 - +0.3
295,292 + -0.2
295,292 + -0.4
295,329 + -0.0
295,364 + +0.8
295,431 + -0.7
295,457 + +1.8
295,457 + -0.2
295,460 + -0.3
295,460 + +1.9
295,461 - -1.4
295,461 - -0.9
295,461 - +0.4
295,542 + CA264_01245 0.16 -0.2
295,543 - CA264_01245 0.16 +2.1
295,677 - CA264_01245 0.28 -0.4
295,677 - CA264_01245 0.28 +0.0
295,677 - CA264_01245 0.28 +0.2
295,684 - CA264_01245 0.28 -0.6
295,721 + CA264_01245 0.31 +0.3
295,721 + CA264_01245 0.31 -0.6
295,721 + CA264_01245 0.31 +1.1
295,722 - CA264_01245 0.32 -0.2
295,753 - CA264_01245 0.34 +0.1
295,811 + CA264_01245 0.39 +0.8
295,812 - CA264_01245 0.39 -0.3
295,812 - CA264_01245 0.39 -0.4
295,843 + CA264_01245 0.42 -0.1
295,855 + CA264_01245 0.43 +0.3
295,926 + CA264_01245 0.49 +1.1
295,930 + CA264_01245 0.49 +0.9
295,971 + CA264_01245 0.53 +0.6
295,971 + CA264_01245 0.53 -1.3
296,342 + CA264_01245 0.84 +0.7
296,390 - CA264_01245 0.88 -0.3
296,400 - CA264_01245 0.89 -0.3
296,452 + -0.0
296,453 - -0.7
296,454 + +1.7
296,454 + +0.0
296,454 + +0.0
296,455 - -0.3
296,455 - +0.5
296,459 - -1.5
296,459 - -0.2
296,460 + -0.1
296,460 + -0.7
296,461 - +0.4
296,520 + -3.0
296,520 + -0.8
296,564 + +0.2
296,588 - -0.4
296,639 + -0.0
296,646 + -0.1
296,738 + +0.9
296,738 + -1.2
296,738 + +1.1
296,739 - +0.6
296,739 - -0.2
296,739 - -1.5
296,775 + -0.0
296,780 + -0.6
296,780 + +1.1
296,788 + +0.0
296,837 + -0.0
296,838 - -0.1
296,949 - +0.0
296,977 + +0.2
296,978 - -1.3
297,183 + CA264_01250 0.16 +1.0
297,196 - CA264_01250 0.16 -1.4
297,245 + CA264_01250 0.18 -0.4
297,246 + CA264_01250 0.18 +0.2
297,248 + CA264_01250 0.18 +0.4
297,270 - CA264_01250 0.19 +0.5
297,286 - CA264_01250 0.19 +0.1
297,336 - CA264_01250 0.21 +0.9
297,337 + CA264_01250 0.21 +1.1
297,352 + CA264_01250 0.21 +0.9
297,385 + CA264_01250 0.22 -0.6
297,498 - CA264_01250 0.26 +0.7

Or see this region's nucleotide sequence