Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00765

Experiment: m.b. Vancomycin 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00760 and CA264_00765 are separated by 64 nucleotidesCA264_00765 and CA264_00770 are separated by 101 nucleotides CA264_00760: CA264_00760 - NAD(+) synthase, at 163,162 to 165,048 _00760 CA264_00765: CA264_00765 - hypothetical protein, at 165,113 to 165,442 _00765 CA264_00770: CA264_00770 - prolipoprotein diacylglyceryl transferase, at 165,544 to 166,395 _00770 Position (kb) 165 166Strain fitness (log2 ratio) -2 -1 0 1 2at 165.028 kb on - strandat 165.046 kb on + strandat 165.046 kb on + strandat 165.046 kb on + strandat 165.046 kb on + strandat 165.047 kb on - strandat 165.047 kb on - strandat 165.047 kb on - strandat 165.047 kb on - strandat 165.047 kb on - strandat 165.065 kb on - strandat 165.069 kb on + strandat 165.203 kb on + strand, within CA264_00765at 165.204 kb on - strand, within CA264_00765at 165.204 kb on - strand, within CA264_00765at 165.206 kb on - strand, within CA264_00765at 165.288 kb on + strand, within CA264_00765at 165.288 kb on + strand, within CA264_00765at 165.289 kb on - strand, within CA264_00765at 165.291 kb on + strand, within CA264_00765at 165.333 kb on + strand, within CA264_00765at 165.467 kb on + strandat 165.468 kb on - strandat 165.490 kb on + strandat 165.491 kb on - strandat 165.530 kb on + strandat 165.530 kb on + strandat 165.531 kb on - strandat 165.531 kb on - strandat 166.394 kb on - strandat 166.410 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml
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165,028 - +0.7
165,046 + +0.0
165,046 + +0.9
165,046 + +0.4
165,046 + +0.7
165,047 - +1.2
165,047 - +0.2
165,047 - +1.0
165,047 - +0.6
165,047 - -0.0
165,065 - +0.7
165,069 + -0.2
165,203 + CA264_00765 0.27 +0.9
165,204 - CA264_00765 0.28 -2.1
165,204 - CA264_00765 0.28 -0.7
165,206 - CA264_00765 0.28 +0.3
165,288 + CA264_00765 0.53 +0.4
165,288 + CA264_00765 0.53 +2.1
165,289 - CA264_00765 0.53 +0.1
165,291 + CA264_00765 0.54 +0.1
165,333 + CA264_00765 0.67 +0.3
165,467 + -0.2
165,468 - +1.0
165,490 + -1.1
165,491 - -0.6
165,530 + -0.3
165,530 + +0.3
165,531 - +0.9
165,531 - -0.7
166,394 - -0.4
166,410 + +1.2

Or see this region's nucleotide sequence