Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1089

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
1,248,476	+		Echvi_1087	0.21	-2.3
1,248,476	+		Echvi_1087	0.21	-1.3
1,248,476	+		Echvi_1087	0.21	-0.4
1,248,477	-		Echvi_1087	0.21	+0.3
1,248,576	+		Echvi_1087	0.38	-0.4
1,248,665	+		Echvi_1087	0.53	-1.6
1,248,666	-		Echvi_1087	0.53	-1.0
1,248,666	-		Echvi_1087	0.53	-0.9
1,248,689	+		Echvi_1087	0.57	-1.1
1,248,690	-		Echvi_1087	0.57	-1.5
1,248,693	+		Echvi_1087	0.58	-0.5
1,248,695	+		Echvi_1087	0.58	+0.4
1,248,731	-		Echvi_1087	0.64	+1.2
1,248,739	+		Echvi_1087	0.66	-2.6
1,248,764	+		Echvi_1087	0.70	+0.3
1,248,764	+		Echvi_1087	0.70	+1.7
1,248,764	+		Echvi_1087	0.70	+0.3
1,248,764	+		Echvi_1087	0.70	-1.0
1,248,764	+		Echvi_1087	0.70	-0.3
1,248,764	+		Echvi_1087	0.70	-0.2
1,248,765	-		Echvi_1087	0.70	-1.2
1,248,765	-		Echvi_1087	0.70	-0.3
1,248,765	-		Echvi_1087	0.70	-0.2
1,248,765	-		Echvi_1087	0.70	+0.1
1,248,784	-		Echvi_1087	0.74	+1.5
1,248,818	+		Echvi_1087	0.79	-1.9
1,248,818	+		Echvi_1087	0.79	-1.9
1,248,819	-		Echvi_1087	0.79	-0.5
1,248,849	+		Echvi_1087	0.85	-1.0
1,248,849	+		Echvi_1087	0.85	+1.1
1,248,896	+				-1.3
1,248,896	+				-1.9
1,248,896	+				-1.3
1,248,897	-				-1.8
1,248,897	-				+0.3
1,248,901	+				+1.0
1,248,907	-				+0.3
1,248,939	-				-1.5
1,248,944	+				-1.8
1,248,945	-				-0.4
1,248,947	+				+1.2
1,248,947	+				-0.2
1,248,948	-				-0.8
1,248,953	+				+0.6
1,248,953	+				-0.8
1,248,954	-				+0.6
1,248,954	-				+0.4
1,248,986	+				+0.4
1,248,986	+				-1.6
1,248,987	-				-2.7
1,248,987	-				-0.5
1,248,987	-				+1.5
1,249,072	-		Echvi_1088	0.12	-0.5
1,249,081	-		Echvi_1088	0.14	-1.7
1,249,139	-		Echvi_1088	0.28	+0.6
1,249,155	+		Echvi_1088	0.32	-0.7
1,249,156	-		Echvi_1088	0.32	+0.9
1,249,162	+		Echvi_1088	0.34	+0.6
1,249,199	+		Echvi_1088	0.43	+0.1
1,249,225	-		Echvi_1088	0.49	+1.3
1,249,239	+		Echvi_1088	0.52	-0.7
1,249,240	-		Echvi_1088	0.53	+0.6
1,249,242	+		Echvi_1088	0.53	-0.6
1,249,271	+		Echvi_1088	0.60	+1.2
1,249,290	+		Echvi_1088	0.65	+0.5
1,249,291	-		Echvi_1088	0.65	+1.6
1,249,296	+		Echvi_1088	0.66	+0.7
1,249,297	-		Echvi_1088	0.66	-0.3
1,249,297	-		Echvi_1088	0.66	-0.0
1,249,297	-		Echvi_1088	0.66	+0.3
1,249,298	+		Echvi_1088	0.67	+0.7
1,249,402	+				+0.1
1,249,403	-				+2.0
1,249,436	-				-0.7
1,249,556	+				-0.6
1,249,573	-				+0.9
1,249,576	+				-0.1
1,249,577	-				-0.2
1,249,577	-				-1.0
1,249,586	-				+0.9
1,249,607	-				-1.2
1,249,612	+				+0.8
1,249,748	-		Echvi_1089	0.17	+0.6
1,249,761	-		Echvi_1089	0.17	-0.4
1,249,777	+		Echvi_1089	0.18	+1.2
1,249,804	+		Echvi_1089	0.20	-2.7
1,249,804	+		Echvi_1089	0.20	-2.0
1,249,804	+		Echvi_1089	0.20	+0.7
1,249,828	+		Echvi_1089	0.21	+0.7
1,249,835	-		Echvi_1089	0.22	-1.5
1,249,846	+		Echvi_1089	0.22	-0.4
1,249,846	+		Echvi_1089	0.22	-0.2
1,249,846	+		Echvi_1089	0.22	-1.8
1,249,846	+		Echvi_1089	0.22	+0.7
1,249,846	+		Echvi_1089	0.22	-1.4
1,249,847	-		Echvi_1089	0.22	+0.6
1,249,847	-		Echvi_1089	0.22	-0.9
1,249,847	-		Echvi_1089	0.22	+0.8
1,249,847	-		Echvi_1089	0.22	-3.1
1,249,847	-		Echvi_1089	0.22	+0.9
1,249,847	-		Echvi_1089	0.22	-0.5
1,249,847	-		Echvi_1089	0.22	+0.1
1,249,847	-		Echvi_1089	0.22	-1.2
1,249,919	-		Echvi_1089	0.26	-0.1
1,249,923	+		Echvi_1089	0.26	-0.2
1,249,977	+		Echvi_1089	0.30	-1.0
1,249,977	+		Echvi_1089	0.30	-0.3
1,249,978	-		Echvi_1089	0.30	-1.7
1,249,978	-		Echvi_1089	0.30	+0.0
1,249,978	-		Echvi_1089	0.30	-1.8
1,249,978	-		Echvi_1089	0.30	-2.2
1,250,019	+		Echvi_1089	0.32	-1.6
1,250,020	-		Echvi_1089	0.32	-0.3
1,250,060	+		Echvi_1089	0.34	-1.3
1,250,091	+		Echvi_1089	0.36	+1.4
1,250,092	-		Echvi_1089	0.36	-2.3
1,250,092	-		Echvi_1089	0.36	-2.8
1,250,280	-		Echvi_1089	0.47	-0.3
1,250,344	+		Echvi_1089	0.50	+1.8
1,250,407	+		Echvi_1089	0.54	-1.2
1,250,408	-		Echvi_1089	0.54	-1.7
1,250,408	-		Echvi_1089	0.54	+0.3
1,250,408	-		Echvi_1089	0.54	+0.5
1,250,413	-		Echvi_1089	0.54	+0.5
1,250,477	-		Echvi_1089	0.58	+0.4
1,250,477	-		Echvi_1089	0.58	+0.0
1,250,539	+		Echvi_1089	0.61	-2.4
1,250,542	+		Echvi_1089	0.61	+0.6
1,250,567	+		Echvi_1089	0.63	+1.4
1,250,616	-		Echvi_1089	0.65	-0.0
1,250,646	+		Echvi_1089	0.67	-1.0
1,250,688	+		Echvi_1089	0.69	-0.5
1,250,689	-		Echvi_1089	0.69	+1.4
1,250,721	+		Echvi_1089	0.71	-0.7
1,250,721	+		Echvi_1089	0.71	+1.2
1,250,721	+		Echvi_1089	0.71	-0.2
1,250,721	+		Echvi_1089	0.71	-0.3
1,250,722	-		Echvi_1089	0.71	+0.2
1,250,722	-		Echvi_1089	0.71	-3.2
1,250,722	-		Echvi_1089	0.71	-1.1
1,250,773	+		Echvi_1089	0.74	+0.8
1,250,774	-		Echvi_1089	0.74	-1.6
1,250,804	+		Echvi_1089	0.76	-0.9
1,250,804	+		Echvi_1089	0.76	-2.5
1,250,862	-		Echvi_1089	0.79	+0.4
1,250,954	+		Echvi_1089	0.84	+1.4
1,250,955	-		Echvi_1089	0.84	-0.8
1,250,989	+		Echvi_1089	0.86	-0.6
1,250,990	-		Echvi_1089	0.86	-0.5
1,250,990	-		Echvi_1089	0.86	-1.5
1,251,011	-		Echvi_1089	0.88	+0.6
1,251,099	+				+0.4
1,251,100	-				+0.4
1,251,128	-				+0.6
1,251,129	+				-0.1
1,251,142	+				-2.2
1,251,142	+				+1.1
1,251,144	+				-1.4
1,251,144	+				-3.3
1,251,144	+				+1.2
1,251,145	-				-1.3
1,251,162	+				-1.0
1,251,179	+				-0.8
1,251,180	-				+0.9
1,251,196	+				+1.0
1,251,196	+				-0.1
1,251,214	+				+0.4
1,251,214	+				+1.1
1,251,214	+				-0.9
1,251,214	+				-0.2
1,251,214	+				+0.5
1,251,215	-				-0.5
1,251,215	-				-1.2
1,251,215	-				+0.6
1,251,215	-				-1.2
1,251,215	-				-1.4
1,251,215	-				+1.6
1,251,215	-				-0.4
1,251,215	-				-2.4
1,251,215	-				-0.9
1,251,234	+				-1.4
1,251,235	-				+0.6
1,251,239	+				+1.4
1,251,239	+				+1.3
1,251,239	+				-0.5
1,251,240	-				+0.9
1,251,240	-				+2.4
1,251,247	+				+0.2
1,251,247	+				-2.9
1,251,247	+				-2.3
1,251,248	-				+0.2
1,251,267	-				+0.6
1,251,317	+				+0.0
1,251,317	+				+0.2
1,251,318	-				-0.0
1,251,318	-				+0.2
1,251,318	-				+1.4
1,251,318	-				-0.8
1,251,318	-				-2.1
1,251,318	-				+2.7
1,251,338	+				-1.2
1,251,339	-				-1.2
1,251,379	-				+1.4
1,251,379	-				-1.5
1,251,379	-				-0.8
1,251,379	-				-0.7
1,251,382	+				-0.2
1,251,382	+				-0.3
1,251,382	+				-1.0
1,251,382	+				-2.6
1,251,383	-				-0.2
1,251,383	-				+0.0
1,251,385	-				-0.8
1,251,515	+				+0.3
1,251,515	+				+0.8
1,251,515	+				+0.7
1,251,515	+				-0.6
1,251,516	-				-1.4
1,251,516	-				+0.1
1,251,516	-				-1.3
1,251,516	-				+0.2
1,251,581	+		Echvi_1090	0.13	+0.6
1,251,582	-		Echvi_1090	0.14	+0.4
1,251,582	-		Echvi_1090	0.14	-1.2
1,251,629	+		Echvi_1090	0.23	-0.9
1,251,629	+		Echvi_1090	0.23	+1.0
1,251,630	-		Echvi_1090	0.23	-1.6
1,251,633	+		Echvi_1090	0.24	-1.5
1,251,633	+		Echvi_1090	0.24	-1.3
1,251,633	+		Echvi_1090	0.24	-1.3
1,251,634	-		Echvi_1090	0.24	+0.0
1,251,670	+		Echvi_1090	0.31	-1.3
1,251,670	+		Echvi_1090	0.31	-0.5
1,251,671	-		Echvi_1090	0.32	+1.4
1,251,692	-		Echvi_1090	0.36	+1.4
1,251,694	-		Echvi_1090	0.36	-2.1
1,251,694	-		Echvi_1090	0.36	+1.4
1,251,721	+		Echvi_1090	0.42	-2.7
1,251,722	-		Echvi_1090	0.42	-0.2
1,251,722	-		Echvi_1090	0.42	+0.2
1,251,806	+		Echvi_1090	0.59	+0.3
1,251,806	+		Echvi_1090	0.59	+0.3
1,251,807	-		Echvi_1090	0.59	+0.6
1,251,830	-		Echvi_1090	0.63	+0.9
1,251,831	+		Echvi_1090	0.64	-1.3
1,251,831	+		Echvi_1090	0.64	+0.3
1,251,831	+		Echvi_1090	0.64	-0.7
1,251,832	-		Echvi_1090	0.64	+0.1
1,251,988	+				+0.8
1,252,000	+				-0.6
1,252,001	-				+0.8
1,252,047	+				-0.8
1,252,068	+				+1.3
1,252,068	+				-1.2
1,252,069	-				-0.9
1,252,069	-				-0.4
1,252,073	+				+1.0
1,252,093	+				+0.0
1,252,148	+				+1.5
1,252,149	-				+0.3
1,252,156	+				+2.4
1,252,156	+				+1.8
1,252,157	-				+1.5
1,252,157	-				+3.0
1,252,212	+				+0.1