Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18300 and CA264_18305 are separated by 108 nucleotides CA264_18305 and CA264_18310 are separated by 307 nucleotides CA264_18310 and CA264_18315 are separated by 429 nucleotides
CA264_18300: CA264_18300 - peptidase M28, at 4,255,782 to 4,257,338
_18300
CA264_18305: CA264_18305 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 4,257,447 to 4,257,932
_18305
CA264_18310: CA264_18310 - hypothetical protein, at 4,258,240 to 4,258,374
_18310
CA264_18315: CA264_18315 - alkene reductase, at 4,258,804 to 4,259,907
_18315
Position (kb)
4257
4258 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4256.479 kb on + strand, within CA264_18300 at 4256.655 kb on + strand, within CA264_18300 at 4256.755 kb on + strand, within CA264_18300 at 4256.755 kb on + strand, within CA264_18300 at 4256.756 kb on - strand, within CA264_18300 at 4256.756 kb on - strand, within CA264_18300 at 4256.844 kb on + strand, within CA264_18300 at 4256.862 kb on + strand, within CA264_18300 at 4256.863 kb on - strand, within CA264_18300 at 4256.877 kb on + strand, within CA264_18300 at 4256.878 kb on - strand, within CA264_18300 at 4256.899 kb on + strand, within CA264_18300 at 4256.900 kb on - strand, within CA264_18300 at 4256.901 kb on + strand, within CA264_18300 at 4256.902 kb on - strand, within CA264_18300 at 4257.140 kb on + strand, within CA264_18300 at 4257.141 kb on - strand, within CA264_18300 at 4257.143 kb on + strand, within CA264_18300 at 4257.143 kb on + strand, within CA264_18300 at 4257.143 kb on + strand, within CA264_18300 at 4257.171 kb on - strand, within CA264_18300 at 4257.330 kb on - strand at 4257.338 kb on + strand at 4257.338 kb on + strand at 4257.339 kb on - strand at 4257.391 kb on - strand at 4257.445 kb on + strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.945 kb on - strand at 4257.945 kb on - strand at 4257.945 kb on - strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.955 kb on + strand at 4257.955 kb on + strand at 4257.955 kb on + strand at 4257.958 kb on + strand at 4257.992 kb on + strand at 4257.992 kb on + strand at 4257.993 kb on - strand at 4257.993 kb on - strand at 4257.996 kb on + strand at 4257.997 kb on - strand at 4258.008 kb on - strand at 4258.019 kb on + strand at 4258.019 kb on + strand at 4258.019 kb on + strand at 4258.020 kb on - strand at 4258.043 kb on + strand at 4258.062 kb on - strand at 4258.066 kb on + strand at 4258.151 kb on - strand at 4258.173 kb on + strand at 4258.235 kb on + strand at 4258.235 kb on + strand at 4258.236 kb on - strand at 4258.373 kb on - strand at 4258.385 kb on - strand at 4258.388 kb on + strand at 4258.413 kb on - strand at 4258.432 kb on - strand at 4258.432 kb on - strand at 4258.435 kb on + strand at 4258.436 kb on - strand at 4258.437 kb on + strand at 4258.437 kb on + strand at 4258.437 kb on + strand at 4258.438 kb on - strand at 4258.506 kb on + strand at 4258.507 kb on - strand at 4258.507 kb on - strand at 4258.548 kb on + strand at 4258.658 kb on + strand at 4258.659 kb on - strand at 4258.659 kb on - strand at 4258.663 kb on - strand at 4258.704 kb on + strand at 4258.704 kb on + strand at 4258.705 kb on - strand at 4258.706 kb on + strand at 4258.707 kb on - strand at 4258.722 kb on + strand at 4258.723 kb on - strand at 4258.782 kb on + strand at 4258.783 kb on - strand at 4258.784 kb on + strand at 4258.787 kb on - strand at 4258.841 kb on + strand at 4258.869 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 4,256,479 + CA264_18300 0.45 -0.3 4,256,655 + CA264_18300 0.56 +1.3 4,256,755 + CA264_18300 0.62 -0.4 4,256,755 + CA264_18300 0.62 +0.1 4,256,756 - CA264_18300 0.63 +1.7 4,256,756 - CA264_18300 0.63 -0.5 4,256,844 + CA264_18300 0.68 -1.4 4,256,862 + CA264_18300 0.69 +0.5 4,256,863 - CA264_18300 0.69 -0.4 4,256,877 + CA264_18300 0.70 -0.8 4,256,878 - CA264_18300 0.70 -0.1 4,256,899 + CA264_18300 0.72 -0.1 4,256,900 - CA264_18300 0.72 +0.6 4,256,901 + CA264_18300 0.72 +0.1 4,256,902 - CA264_18300 0.72 -0.4 4,257,140 + CA264_18300 0.87 -0.3 4,257,141 - CA264_18300 0.87 +0.3 4,257,143 + CA264_18300 0.87 -0.4 4,257,143 + CA264_18300 0.87 -0.0 4,257,143 + CA264_18300 0.87 +1.0 4,257,171 - CA264_18300 0.89 -0.1 4,257,330 - -0.1 4,257,338 + -1.1 4,257,338 + -2.2 4,257,339 - +1.0 4,257,391 - -0.4 4,257,445 + +0.3 4,257,449 - -0.4 4,257,449 - -0.0 4,257,449 - -1.3 4,257,449 - +0.1 4,257,945 - -0.0 4,257,945 - +0.9 4,257,945 - -0.2 4,257,948 + +1.2 4,257,948 + +0.6 4,257,948 + +0.5 4,257,948 + +0.4 4,257,948 + -0.0 4,257,949 - +0.9 4,257,949 - -1.0 4,257,949 - -0.4 4,257,949 - +2.1 4,257,949 - -0.5 4,257,955 + -0.1 4,257,955 + -0.6 4,257,955 + +0.5 4,257,958 + -1.3 4,257,992 + -0.3 4,257,992 + -0.4 4,257,993 - -0.6 4,257,993 - -1.1 4,257,996 + +0.2 4,257,997 - -0.5 4,258,008 - -1.0 4,258,019 + +0.2 4,258,019 + -0.7 4,258,019 + -0.4 4,258,020 - -0.7 4,258,043 + +0.5 4,258,062 - -1.8 4,258,066 + +0.4 4,258,151 - -0.5 4,258,173 + +0.9 4,258,235 + -1.2 4,258,235 + -0.3 4,258,236 - -1.8 4,258,373 - -0.5 4,258,385 - -2.2 4,258,388 + +0.1 4,258,413 - +0.7 4,258,432 - +0.1 4,258,432 - +0.2 4,258,435 + -0.1 4,258,436 - +0.0 4,258,437 + -0.1 4,258,437 + +0.6 4,258,437 + -0.2 4,258,438 - -0.1 4,258,506 + +0.1 4,258,507 - -0.6 4,258,507 - +0.8 4,258,548 + -0.1 4,258,658 + +0.0 4,258,659 - -1.2 4,258,659 - -0.8 4,258,663 - +1.7 4,258,704 + -0.8 4,258,704 + +0.8 4,258,705 - -0.7 4,258,706 + -0.3 4,258,707 - -0.7 4,258,722 + -1.6 4,258,723 - -0.4 4,258,782 + -2.3 4,258,783 - -0.7 4,258,784 + +0.4 4,258,787 - +0.1 4,258,841 + -0.2 4,258,869 + +0.4
Or see this region's nucleotide sequence