Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18115 and CA264_18120 are separated by 143 nucleotides CA264_18120 and CA264_18125 are separated by 201 nucleotides
CA264_18115: CA264_18115 - Rossman fold protein, TIGR00730 family, at 4,212,495 to 4,213,358
_18115
CA264_18120: CA264_18120 - ABC transporter, at 4,213,502 to 4,214,749
_18120
CA264_18125: CA264_18125 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 4,214,951 to 4,215,997
_18125
Position (kb)
4213
4214
4215 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4213.434 kb on - strand at 4213.493 kb on + strand at 4213.493 kb on + strand at 4213.494 kb on - strand at 4213.494 kb on - strand at 4213.494 kb on - strand at 4213.497 kb on + strand at 4213.497 kb on + strand at 4213.497 kb on + strand at 4213.497 kb on + strand at 4213.498 kb on - strand at 4213.498 kb on - strand at 4213.499 kb on + strand at 4213.499 kb on + strand at 4213.499 kb on + strand at 4213.503 kb on + strand at 4213.504 kb on - strand at 4213.532 kb on + strand at 4213.556 kb on + strand at 4213.556 kb on + strand at 4213.556 kb on + strand at 4213.577 kb on + strand at 4213.604 kb on + strand at 4213.605 kb on - strand at 4213.605 kb on - strand at 4213.605 kb on - strand at 4213.607 kb on - strand at 4213.607 kb on - strand at 4213.738 kb on + strand, within CA264_18120 at 4213.739 kb on - strand, within CA264_18120 at 4213.842 kb on - strand, within CA264_18120 at 4213.842 kb on - strand, within CA264_18120 at 4213.910 kb on + strand, within CA264_18120 at 4213.910 kb on + strand, within CA264_18120 at 4213.911 kb on - strand, within CA264_18120 at 4213.967 kb on + strand, within CA264_18120 at 4213.968 kb on - strand, within CA264_18120 at 4214.036 kb on + strand, within CA264_18120 at 4214.045 kb on - strand, within CA264_18120 at 4214.069 kb on + strand, within CA264_18120 at 4214.070 kb on - strand, within CA264_18120 at 4214.159 kb on + strand, within CA264_18120 at 4214.159 kb on + strand, within CA264_18120 at 4214.169 kb on - strand, within CA264_18120 at 4214.169 kb on - strand, within CA264_18120 at 4214.169 kb on - strand, within CA264_18120 at 4214.347 kb on - strand, within CA264_18120 at 4214.395 kb on + strand, within CA264_18120 at 4214.446 kb on + strand, within CA264_18120 at 4214.447 kb on - strand, within CA264_18120 at 4214.502 kb on + strand, within CA264_18120 at 4214.503 kb on - strand, within CA264_18120 at 4214.503 kb on - strand, within CA264_18120 at 4214.503 kb on - strand, within CA264_18120 at 4214.518 kb on - strand, within CA264_18120 at 4214.553 kb on + strand, within CA264_18120 at 4214.553 kb on + strand, within CA264_18120 at 4214.553 kb on + strand, within CA264_18120 at 4214.554 kb on - strand, within CA264_18120 at 4214.554 kb on - strand, within CA264_18120 at 4214.558 kb on - strand, within CA264_18120 at 4214.612 kb on + strand, within CA264_18120 at 4214.653 kb on + strand at 4214.742 kb on + strand at 4214.742 kb on + strand at 4214.743 kb on - strand at 4214.744 kb on + strand at 4214.744 kb on + strand at 4214.744 kb on + strand at 4214.745 kb on - strand at 4214.745 kb on - strand at 4214.745 kb on - strand at 4214.745 kb on - strand at 4214.749 kb on - strand at 4214.773 kb on + strand at 4214.773 kb on + strand at 4214.779 kb on - strand at 4214.795 kb on + strand at 4214.801 kb on + strand at 4214.807 kb on + strand at 4214.854 kb on - strand at 4214.867 kb on + strand at 4214.911 kb on - strand at 4214.918 kb on - strand at 4214.933 kb on + strand at 4214.941 kb on + strand at 4214.951 kb on - strand at 4214.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 4,213,434 - +0.3 4,213,493 + +0.4 4,213,493 + +0.1 4,213,494 - +1.1 4,213,494 - +0.2 4,213,494 - +0.4 4,213,497 + -0.3 4,213,497 + -0.6 4,213,497 + +0.4 4,213,497 + -0.4 4,213,498 - +0.8 4,213,498 - -0.7 4,213,499 + -0.1 4,213,499 + -0.1 4,213,499 + +0.4 4,213,503 + -0.5 4,213,504 - -0.1 4,213,532 + -0.2 4,213,556 + -0.2 4,213,556 + -0.1 4,213,556 + +1.1 4,213,577 + +0.4 4,213,604 + -0.6 4,213,605 - -0.8 4,213,605 - +1.4 4,213,605 - +0.1 4,213,607 - +1.0 4,213,607 - +1.2 4,213,738 + CA264_18120 0.19 +1.0 4,213,739 - CA264_18120 0.19 +0.1 4,213,842 - CA264_18120 0.27 -0.4 4,213,842 - CA264_18120 0.27 -0.1 4,213,910 + CA264_18120 0.33 +0.1 4,213,910 + CA264_18120 0.33 -0.8 4,213,911 - CA264_18120 0.33 -1.1 4,213,967 + CA264_18120 0.37 -0.9 4,213,968 - CA264_18120 0.37 +0.0 4,214,036 + CA264_18120 0.43 -0.2 4,214,045 - CA264_18120 0.44 -0.3 4,214,069 + CA264_18120 0.45 +0.1 4,214,070 - CA264_18120 0.46 +0.9 4,214,159 + CA264_18120 0.53 -0.6 4,214,159 + CA264_18120 0.53 -0.3 4,214,169 - CA264_18120 0.53 -0.8 4,214,169 - CA264_18120 0.53 +0.5 4,214,169 - CA264_18120 0.53 +0.4 4,214,347 - CA264_18120 0.68 +0.9 4,214,395 + CA264_18120 0.72 -0.9 4,214,446 + CA264_18120 0.76 +1.1 4,214,447 - CA264_18120 0.76 -0.5 4,214,502 + CA264_18120 0.80 +0.1 4,214,503 - CA264_18120 0.80 +0.7 4,214,503 - CA264_18120 0.80 +0.9 4,214,503 - CA264_18120 0.80 -0.4 4,214,518 - CA264_18120 0.81 +0.0 4,214,553 + CA264_18120 0.84 -0.5 4,214,553 + CA264_18120 0.84 +2.7 4,214,553 + CA264_18120 0.84 +0.1 4,214,554 - CA264_18120 0.84 -1.3 4,214,554 - CA264_18120 0.84 -0.5 4,214,558 - CA264_18120 0.85 -1.4 4,214,612 + CA264_18120 0.89 +0.0 4,214,653 + +0.7 4,214,742 + -2.1 4,214,742 + +1.4 4,214,743 - +1.0 4,214,744 + -0.6 4,214,744 + -0.2 4,214,744 + -0.9 4,214,745 - -0.5 4,214,745 - +0.5 4,214,745 - -0.4 4,214,745 - -0.9 4,214,749 - -0.1 4,214,773 + -0.4 4,214,773 + -0.0 4,214,779 - -0.5 4,214,795 + -0.2 4,214,801 + +0.1 4,214,807 + +0.2 4,214,854 - -0.1 4,214,867 + +0.3 4,214,911 - -1.4 4,214,918 - -0.3 4,214,933 + +0.4 4,214,941 + +0.8 4,214,951 - -0.3 4,214,951 - -0.5
Or see this region's nucleotide sequence