Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17895 and CA264_17900 are separated by 235 nucleotides CA264_17900 and CA264_17905 are separated by 3 nucleotides
CA264_17895: CA264_17895 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 4,160,268 to 4,161,122
_17895
CA264_17900: CA264_17900 - UDP-N-acetyl-D-galactosamine dehydrogenase, at 4,161,358 to 4,162,647
_17900
CA264_17905: CA264_17905 - UDP-glucose 4-epimerase GalE, at 4,162,651 to 4,163,685
_17905
Position (kb)
4161
4162
4163 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4160.844 kb on + strand, within CA264_17895 at 4161.143 kb on + strand at 4161.144 kb on - strand at 4161.244 kb on + strand at 4161.244 kb on + strand at 4161.244 kb on + strand at 4161.245 kb on - strand at 4161.245 kb on - strand at 4161.332 kb on + strand at 4161.345 kb on - strand at 4161.345 kb on - strand at 4161.345 kb on - strand at 4161.351 kb on + strand at 4161.355 kb on + strand at 4161.356 kb on - strand at 4161.356 kb on - strand at 4161.361 kb on + strand at 4161.376 kb on - strand at 4161.376 kb on - strand at 4161.399 kb on + strand at 4161.412 kb on + strand at 4161.413 kb on - strand at 4161.475 kb on - strand at 4161.475 kb on - strand at 4161.618 kb on + strand, within CA264_17900 at 4161.619 kb on - strand, within CA264_17900 at 4161.630 kb on + strand, within CA264_17900 at 4161.630 kb on + strand, within CA264_17900 at 4161.631 kb on - strand, within CA264_17900 at 4161.706 kb on + strand, within CA264_17900 at 4161.706 kb on + strand, within CA264_17900 at 4161.706 kb on + strand, within CA264_17900 at 4161.804 kb on + strand, within CA264_17900 at 4161.804 kb on + strand, within CA264_17900 at 4161.844 kb on - strand, within CA264_17900 at 4161.844 kb on - strand, within CA264_17900 at 4161.922 kb on + strand, within CA264_17900 at 4161.935 kb on + strand, within CA264_17900 at 4161.963 kb on + strand, within CA264_17900 at 4162.053 kb on + strand, within CA264_17900 at 4162.072 kb on + strand, within CA264_17900 at 4162.166 kb on - strand, within CA264_17900 at 4162.166 kb on - strand, within CA264_17900 at 4162.169 kb on + strand, within CA264_17900 at 4162.174 kb on + strand, within CA264_17900 at 4162.174 kb on + strand, within CA264_17900 at 4162.175 kb on - strand, within CA264_17900 at 4162.175 kb on - strand, within CA264_17900 at 4162.175 kb on - strand, within CA264_17900 at 4162.175 kb on - strand, within CA264_17900 at 4162.177 kb on - strand, within CA264_17900 at 4162.196 kb on - strand, within CA264_17900 at 4162.210 kb on - strand, within CA264_17900 at 4162.237 kb on - strand, within CA264_17900 at 4162.391 kb on + strand, within CA264_17900 at 4162.429 kb on + strand, within CA264_17900 at 4162.434 kb on + strand, within CA264_17900 at 4162.495 kb on + strand, within CA264_17900 at 4162.496 kb on - strand, within CA264_17900 at 4162.531 kb on + strand at 4162.552 kb on + strand at 4162.553 kb on - strand at 4162.553 kb on - strand at 4162.628 kb on + strand at 4162.629 kb on - strand at 4162.629 kb on - strand at 4162.634 kb on - strand at 4162.644 kb on - strand at 4162.644 kb on - strand at 4162.644 kb on - strand at 4162.690 kb on + strand at 4162.691 kb on - strand at 4162.692 kb on + strand at 4162.693 kb on - strand at 4162.712 kb on + strand at 4162.722 kb on - strand at 4162.733 kb on - strand at 4162.799 kb on + strand, within CA264_17905 at 4162.800 kb on - strand, within CA264_17905 at 4162.800 kb on - strand, within CA264_17905 at 4162.909 kb on + strand, within CA264_17905 at 4162.910 kb on - strand, within CA264_17905 at 4162.911 kb on + strand, within CA264_17905 at 4162.912 kb on - strand, within CA264_17905 at 4162.920 kb on - strand at 4162.948 kb on + strand, within CA264_17905 at 4162.948 kb on + strand, within CA264_17905 at 4162.948 kb on + strand, within CA264_17905 at 4163.011 kb on - strand, within CA264_17905 at 4163.044 kb on + strand, within CA264_17905 at 4163.044 kb on + strand, within CA264_17905 at 4163.044 kb on + strand, within CA264_17905 at 4163.175 kb on - strand, within CA264_17905 at 4163.175 kb on - strand, within CA264_17905 at 4163.275 kb on - strand, within CA264_17905 at 4163.292 kb on - strand, within CA264_17905 at 4163.362 kb on + strand, within CA264_17905 at 4163.362 kb on + strand, within CA264_17905 at 4163.363 kb on - strand, within CA264_17905 at 4163.527 kb on + strand, within CA264_17905 at 4163.579 kb on + strand, within CA264_17905 at 4163.579 kb on + strand, within CA264_17905 at 4163.579 kb on + strand, within CA264_17905 at 4163.586 kb on - strand at 4163.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 4,160,844 + CA264_17895 0.67 +0.6 4,161,143 + +0.7 4,161,144 - -0.1 4,161,244 + -1.1 4,161,244 + -0.2 4,161,244 + -0.2 4,161,245 - +1.4 4,161,245 - +0.6 4,161,332 + +1.5 4,161,345 - -1.8 4,161,345 - -0.2 4,161,345 - +0.6 4,161,351 + +0.1 4,161,355 + +0.8 4,161,356 - -0.6 4,161,356 - -0.3 4,161,361 + -0.2 4,161,376 - +0.0 4,161,376 - -1.3 4,161,399 + -0.3 4,161,412 + +0.4 4,161,413 - -0.8 4,161,475 - -0.3 4,161,475 - +0.2 4,161,618 + CA264_17900 0.20 +0.1 4,161,619 - CA264_17900 0.20 -0.8 4,161,630 + CA264_17900 0.21 +0.3 4,161,630 + CA264_17900 0.21 -1.8 4,161,631 - CA264_17900 0.21 +0.9 4,161,706 + CA264_17900 0.27 -0.6 4,161,706 + CA264_17900 0.27 -2.4 4,161,706 + CA264_17900 0.27 +0.7 4,161,804 + CA264_17900 0.35 +0.4 4,161,804 + CA264_17900 0.35 -0.2 4,161,844 - CA264_17900 0.38 -0.4 4,161,844 - CA264_17900 0.38 +1.3 4,161,922 + CA264_17900 0.44 +0.6 4,161,935 + CA264_17900 0.45 -1.5 4,161,963 + CA264_17900 0.47 -0.6 4,162,053 + CA264_17900 0.54 -0.3 4,162,072 + CA264_17900 0.55 +0.6 4,162,166 - CA264_17900 0.63 +1.2 4,162,166 - CA264_17900 0.63 +1.4 4,162,169 + CA264_17900 0.63 +0.5 4,162,174 + CA264_17900 0.63 +0.1 4,162,174 + CA264_17900 0.63 -0.8 4,162,175 - CA264_17900 0.63 +0.0 4,162,175 - CA264_17900 0.63 -1.5 4,162,175 - CA264_17900 0.63 -0.6 4,162,175 - CA264_17900 0.63 +0.1 4,162,177 - CA264_17900 0.63 -0.1 4,162,196 - CA264_17900 0.65 -0.1 4,162,210 - CA264_17900 0.66 -1.1 4,162,237 - CA264_17900 0.68 -0.5 4,162,391 + CA264_17900 0.80 -0.6 4,162,429 + CA264_17900 0.83 +1.8 4,162,434 + CA264_17900 0.83 -0.4 4,162,495 + CA264_17900 0.88 +0.2 4,162,496 - CA264_17900 0.88 -0.2 4,162,531 + +0.6 4,162,552 + -0.8 4,162,553 - +0.2 4,162,553 - -0.1 4,162,628 + -0.7 4,162,629 - +0.3 4,162,629 - +1.2 4,162,634 - -0.3 4,162,644 - +0.1 4,162,644 - +0.3 4,162,644 - -0.0 4,162,690 + -1.0 4,162,691 - -0.9 4,162,692 + -0.5 4,162,693 - -1.4 4,162,712 + +0.8 4,162,722 - +0.3 4,162,733 - +1.0 4,162,799 + CA264_17905 0.14 +0.8 4,162,800 - CA264_17905 0.14 -0.4 4,162,800 - CA264_17905 0.14 -1.1 4,162,909 + CA264_17905 0.25 -0.3 4,162,910 - CA264_17905 0.25 -0.8 4,162,911 + CA264_17905 0.25 -0.1 4,162,912 - CA264_17905 0.25 -0.3 4,162,920 - +1.2 4,162,948 + CA264_17905 0.29 -0.4 4,162,948 + CA264_17905 0.29 -0.4 4,162,948 + CA264_17905 0.29 -1.1 4,163,011 - CA264_17905 0.35 -1.3 4,163,044 + CA264_17905 0.38 -0.8 4,163,044 + CA264_17905 0.38 -1.0 4,163,044 + CA264_17905 0.38 -0.8 4,163,175 - CA264_17905 0.51 -0.4 4,163,175 - CA264_17905 0.51 -1.3 4,163,275 - CA264_17905 0.60 +0.8 4,163,292 - CA264_17905 0.62 -1.4 4,163,362 + CA264_17905 0.69 +0.1 4,163,362 + CA264_17905 0.69 -0.7 4,163,363 - CA264_17905 0.69 +0.2 4,163,527 + CA264_17905 0.85 -1.2 4,163,579 + CA264_17905 0.90 -0.2 4,163,579 + CA264_17905 0.90 -0.3 4,163,579 + CA264_17905 0.90 +0.8 4,163,586 - -0.9 4,163,635 - +2.3
Or see this region's nucleotide sequence