Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09840 and CA264_09845 are separated by 607 nucleotides CA264_09845 and CA264_09850 are separated by 14 nucleotides
CA264_09840: CA264_09840 - hypothetical protein, at 2,289,364 to 2,289,576
_09840
CA264_09845: CA264_09845 - LLM class flavin-dependent oxidoreductase, at 2,290,184 to 2,291,098
_09845
CA264_09850: CA264_09850 - hypothetical protein, at 2,291,113 to 2,292,294
_09850
Position (kb)
2290
2291
2292 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2289.247 kb on + strand at 2289.247 kb on + strand at 2289.251 kb on + strand at 2289.252 kb on - strand at 2289.272 kb on + strand at 2289.272 kb on + strand at 2289.273 kb on - strand at 2289.312 kb on - strand at 2289.332 kb on + strand at 2289.333 kb on - strand at 2289.338 kb on - strand at 2289.338 kb on - strand at 2289.347 kb on + strand at 2289.362 kb on - strand at 2289.689 kb on + strand at 2289.753 kb on + strand at 2289.753 kb on + strand at 2289.821 kb on - strand at 2289.821 kb on - strand at 2289.821 kb on - strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.852 kb on + strand at 2289.853 kb on - strand at 2289.941 kb on + strand at 2289.946 kb on + strand at 2289.946 kb on + strand at 2289.946 kb on + strand at 2289.947 kb on - strand at 2289.947 kb on - strand at 2289.947 kb on - strand at 2289.966 kb on + strand at 2289.993 kb on - strand at 2290.064 kb on + strand at 2290.065 kb on - strand at 2290.140 kb on - strand at 2290.143 kb on + strand at 2290.265 kb on + strand at 2290.266 kb on - strand at 2290.266 kb on - strand at 2290.314 kb on + strand, within CA264_09845 at 2290.315 kb on - strand, within CA264_09845 at 2290.315 kb on - strand, within CA264_09845 at 2290.344 kb on + strand, within CA264_09845 at 2290.345 kb on - strand, within CA264_09845 at 2290.345 kb on - strand, within CA264_09845 at 2290.397 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.554 kb on - strand, within CA264_09845 at 2290.554 kb on - strand, within CA264_09845 at 2290.557 kb on + strand, within CA264_09845 at 2290.557 kb on + strand, within CA264_09845 at 2290.558 kb on - strand, within CA264_09845 at 2290.607 kb on + strand, within CA264_09845 at 2290.608 kb on - strand, within CA264_09845 at 2290.714 kb on + strand, within CA264_09845 at 2290.751 kb on + strand, within CA264_09845 at 2290.787 kb on + strand, within CA264_09845 at 2290.807 kb on - strand, within CA264_09845 at 2290.826 kb on - strand, within CA264_09845 at 2290.863 kb on - strand, within CA264_09845 at 2290.889 kb on + strand, within CA264_09845 at 2290.890 kb on - strand, within CA264_09845 at 2290.890 kb on - strand, within CA264_09845 at 2290.960 kb on - strand, within CA264_09845 at 2290.997 kb on + strand, within CA264_09845 at 2291.081 kb on + strand at 2291.295 kb on - strand, within CA264_09850 at 2291.295 kb on - strand, within CA264_09850 at 2291.359 kb on + strand, within CA264_09850 at 2291.380 kb on + strand, within CA264_09850 at 2291.391 kb on + strand, within CA264_09850 at 2291.392 kb on - strand, within CA264_09850 at 2291.392 kb on - strand, within CA264_09850 at 2291.392 kb on - strand, within CA264_09850 at 2291.412 kb on + strand, within CA264_09850 at 2291.413 kb on - strand, within CA264_09850 at 2291.413 kb on - strand, within CA264_09850 at 2291.482 kb on - strand, within CA264_09850 at 2291.482 kb on - strand, within CA264_09850 at 2291.482 kb on - strand, within CA264_09850 at 2291.574 kb on + strand, within CA264_09850 at 2291.575 kb on - strand, within CA264_09850 at 2291.583 kb on - strand, within CA264_09850 at 2291.592 kb on - strand, within CA264_09850 at 2291.635 kb on + strand, within CA264_09850 at 2291.635 kb on + strand, within CA264_09850 at 2291.646 kb on - strand, within CA264_09850 at 2291.704 kb on + strand, within CA264_09850 at 2291.723 kb on + strand, within CA264_09850 at 2291.723 kb on + strand, within CA264_09850 at 2291.724 kb on - strand, within CA264_09850 at 2291.724 kb on - strand, within CA264_09850 at 2291.757 kb on + strand, within CA264_09850 at 2291.759 kb on + strand, within CA264_09850 at 2291.760 kb on - strand, within CA264_09850 at 2291.760 kb on - strand, within CA264_09850 at 2291.791 kb on - strand, within CA264_09850 at 2291.795 kb on - strand, within CA264_09850 at 2291.816 kb on - strand, within CA264_09850 at 2291.816 kb on - strand, within CA264_09850 at 2291.816 kb on - strand, within CA264_09850 at 2291.819 kb on + strand, within CA264_09850 at 2291.820 kb on - strand, within CA264_09850 at 2291.849 kb on + strand, within CA264_09850 at 2291.850 kb on - strand, within CA264_09850 at 2291.885 kb on + strand, within CA264_09850 at 2291.886 kb on - strand, within CA264_09850 at 2291.886 kb on - strand, within CA264_09850 at 2291.896 kb on + strand, within CA264_09850 at 2291.935 kb on + strand, within CA264_09850 at 2291.935 kb on + strand, within CA264_09850 at 2291.935 kb on + strand, within CA264_09850 at 2291.936 kb on - strand, within CA264_09850 at 2291.936 kb on - strand, within CA264_09850 at 2291.936 kb on - strand, within CA264_09850 at 2291.943 kb on + strand, within CA264_09850 at 2291.948 kb on - strand, within CA264_09850 at 2291.962 kb on + strand, within CA264_09850 at 2291.967 kb on + strand, within CA264_09850 at 2291.968 kb on - strand, within CA264_09850 at 2291.970 kb on + strand, within CA264_09850 at 2291.971 kb on - strand, within CA264_09850 at 2291.991 kb on - strand, within CA264_09850 at 2292.004 kb on + strand, within CA264_09850 at 2292.004 kb on + strand, within CA264_09850 at 2292.005 kb on - strand, within CA264_09850 at 2292.005 kb on - strand, within CA264_09850 at 2292.025 kb on + strand, within CA264_09850 at 2292.034 kb on + strand, within CA264_09850 at 2292.057 kb on + strand, within CA264_09850 at 2292.058 kb on - strand, within CA264_09850
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 2,289,247 + +0.8 2,289,247 + -0.1 2,289,251 + +0.4 2,289,252 - +0.3 2,289,272 + -0.2 2,289,272 + -0.0 2,289,273 - -1.3 2,289,312 - -1.3 2,289,332 + -0.1 2,289,333 - +0.6 2,289,338 - -0.1 2,289,338 - -1.1 2,289,347 + +0.5 2,289,362 - +0.2 2,289,689 + -0.6 2,289,753 + +1.0 2,289,753 + +0.7 2,289,821 - -0.1 2,289,821 - +0.7 2,289,821 - -0.2 2,289,849 + +0.2 2,289,849 + -0.0 2,289,849 + +0.1 2,289,849 + +0.3 2,289,849 + -0.0 2,289,850 - -0.6 2,289,850 - +1.3 2,289,850 - -0.1 2,289,850 - -0.7 2,289,850 - +1.5 2,289,852 + +0.7 2,289,853 - -0.4 2,289,941 + +0.2 2,289,946 + -0.7 2,289,946 + -0.1 2,289,946 + +0.2 2,289,947 - +1.3 2,289,947 - +0.3 2,289,947 - -0.0 2,289,966 + -0.0 2,289,993 - +0.5 2,290,064 + -1.0 2,290,065 - -0.7 2,290,140 - -0.1 2,290,143 + -0.7 2,290,265 + +0.4 2,290,266 - +0.3 2,290,266 - -0.8 2,290,314 + CA264_09845 0.14 -0.3 2,290,315 - CA264_09845 0.14 +0.5 2,290,315 - CA264_09845 0.14 -0.1 2,290,344 + CA264_09845 0.17 -0.5 2,290,345 - CA264_09845 0.18 -0.2 2,290,345 - CA264_09845 0.18 -0.5 2,290,397 + CA264_09845 0.23 -0.7 2,290,553 + CA264_09845 0.40 +0.3 2,290,553 + CA264_09845 0.40 +0.3 2,290,553 + CA264_09845 0.40 +0.5 2,290,553 + CA264_09845 0.40 -0.4 2,290,553 + CA264_09845 0.40 +0.0 2,290,554 - CA264_09845 0.40 +0.1 2,290,554 - CA264_09845 0.40 +0.1 2,290,557 + CA264_09845 0.41 +0.0 2,290,557 + CA264_09845 0.41 +0.0 2,290,558 - CA264_09845 0.41 -0.0 2,290,607 + CA264_09845 0.46 -0.4 2,290,608 - CA264_09845 0.46 +0.4 2,290,714 + CA264_09845 0.58 -0.7 2,290,751 + CA264_09845 0.62 -0.2 2,290,787 + CA264_09845 0.66 -0.1 2,290,807 - CA264_09845 0.68 -0.5 2,290,826 - CA264_09845 0.70 -0.2 2,290,863 - CA264_09845 0.74 +1.3 2,290,889 + CA264_09845 0.77 -0.0 2,290,890 - CA264_09845 0.77 -0.3 2,290,890 - CA264_09845 0.77 -0.1 2,290,960 - CA264_09845 0.85 -0.5 2,290,997 + CA264_09845 0.89 +0.1 2,291,081 + +1.5 2,291,295 - CA264_09850 0.15 +0.3 2,291,295 - CA264_09850 0.15 +0.1 2,291,359 + CA264_09850 0.21 +0.4 2,291,380 + CA264_09850 0.23 -0.0 2,291,391 + CA264_09850 0.24 +0.3 2,291,392 - CA264_09850 0.24 -1.3 2,291,392 - CA264_09850 0.24 +0.8 2,291,392 - CA264_09850 0.24 -0.0 2,291,412 + CA264_09850 0.25 -0.3 2,291,413 - CA264_09850 0.25 -0.3 2,291,413 - CA264_09850 0.25 +0.8 2,291,482 - CA264_09850 0.31 +0.5 2,291,482 - CA264_09850 0.31 -0.9 2,291,482 - CA264_09850 0.31 +1.0 2,291,574 + CA264_09850 0.39 +1.1 2,291,575 - CA264_09850 0.39 +0.3 2,291,583 - CA264_09850 0.40 +1.3 2,291,592 - CA264_09850 0.41 -0.1 2,291,635 + CA264_09850 0.44 -0.6 2,291,635 + CA264_09850 0.44 -0.2 2,291,646 - CA264_09850 0.45 +0.9 2,291,704 + CA264_09850 0.50 -1.1 2,291,723 + CA264_09850 0.52 -0.2 2,291,723 + CA264_09850 0.52 -0.3 2,291,724 - CA264_09850 0.52 -0.3 2,291,724 - CA264_09850 0.52 +0.2 2,291,757 + CA264_09850 0.54 -0.1 2,291,759 + CA264_09850 0.55 -0.1 2,291,760 - CA264_09850 0.55 +0.8 2,291,760 - CA264_09850 0.55 -0.0 2,291,791 - CA264_09850 0.57 -0.1 2,291,795 - CA264_09850 0.58 +0.5 2,291,816 - CA264_09850 0.59 +0.2 2,291,816 - CA264_09850 0.59 -0.1 2,291,816 - CA264_09850 0.59 +0.5 2,291,819 + CA264_09850 0.60 -0.0 2,291,820 - CA264_09850 0.60 -0.6 2,291,849 + CA264_09850 0.62 -0.8 2,291,850 - CA264_09850 0.62 -0.5 2,291,885 + CA264_09850 0.65 +0.3 2,291,886 - CA264_09850 0.65 +0.7 2,291,886 - CA264_09850 0.65 -0.1 2,291,896 + CA264_09850 0.66 -0.2 2,291,935 + CA264_09850 0.70 -0.5 2,291,935 + CA264_09850 0.70 -0.1 2,291,935 + CA264_09850 0.70 +0.0 2,291,936 - CA264_09850 0.70 +0.1 2,291,936 - CA264_09850 0.70 -0.9 2,291,936 - CA264_09850 0.70 -0.5 2,291,943 + CA264_09850 0.70 -0.4 2,291,948 - CA264_09850 0.71 -0.3 2,291,962 + CA264_09850 0.72 -0.5 2,291,967 + CA264_09850 0.72 -1.0 2,291,968 - CA264_09850 0.72 +0.0 2,291,970 + CA264_09850 0.73 -0.3 2,291,971 - CA264_09850 0.73 -1.4 2,291,991 - CA264_09850 0.74 -0.4 2,292,004 + CA264_09850 0.75 -0.7 2,292,004 + CA264_09850 0.75 -0.5 2,292,005 - CA264_09850 0.75 -0.5 2,292,005 - CA264_09850 0.75 -1.6 2,292,025 + CA264_09850 0.77 +2.5 2,292,034 + CA264_09850 0.78 -0.1 2,292,057 + CA264_09850 0.80 -1.8 2,292,058 - CA264_09850 0.80 -0.6
Or see this region's nucleotide sequence