Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04660
Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Vancomycin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,075,683 | + | -0.1 | |||
1,075,719 | - | CA264_04655 | 0.12 | +0.1 | |
1,075,766 | + | CA264_04655 | 0.17 | -2.0 | |
1,075,767 | - | CA264_04655 | 0.17 | +0.1 | |
1,075,890 | + | CA264_04655 | 0.31 | -1.7 | |
1,075,891 | - | CA264_04655 | 0.31 | -0.2 | |
1,075,917 | - | CA264_04655 | 0.34 | -0.5 | |
1,076,046 | - | CA264_04655 | 0.48 | -0.8 | |
1,076,046 | - | CA264_04655 | 0.48 | -1.3 | |
1,076,234 | + | CA264_04655 | 0.69 | -1.6 | |
1,076,270 | + | CA264_04655 | 0.73 | -1.4 | |
1,076,270 | + | CA264_04655 | 0.73 | -2.0 | |
1,076,271 | - | CA264_04655 | 0.73 | -2.6 | |
1,076,336 | + | CA264_04655 | 0.81 | -0.8 | |
1,076,336 | + | CA264_04655 | 0.81 | -1.0 | |
1,076,336 | + | CA264_04655 | 0.81 | -2.9 | |
1,076,337 | - | CA264_04655 | 0.81 | +0.1 | |
1,076,398 | + | CA264_04655 | 0.88 | -1.7 | |
1,076,514 | - | -0.2 | |||
1,076,514 | - | +1.4 | |||
1,076,516 | - | +0.7 | |||
1,076,540 | - | +0.2 | |||
1,076,542 | - | -0.4 | |||
1,076,608 | + | -1.0 | |||
1,076,609 | - | +1.3 | |||
1,076,614 | - | +0.3 | |||
1,078,233 | - | CA264_04660 | 0.36 | -0.4 | |
1,080,984 | - | +0.1 | |||
1,081,114 | + | -0.7 |
Or see this region's nucleotide sequence