Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02155 and CA264_02160 are separated by 319 nucleotides CA264_02160 and CA264_02165 are separated by 231 nucleotides
CA264_02155: CA264_02155 - peptidase M23, at 496,041 to 497,378
_02155
CA264_02160: CA264_02160 - hypothetical protein, at 497,698 to 498,264
_02160
CA264_02165: CA264_02165 - dihydrolipoyl dehydrogenase, at 498,496 to 499,890
_02165
Position (kb) 497
498
499 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 496.803 kb on + strand, within CA264_02155 at 496.860 kb on + strand, within CA264_02155 at 496.862 kb on + strand, within CA264_02155 at 496.976 kb on - strand, within CA264_02155 at 497.004 kb on + strand, within CA264_02155 at 497.005 kb on - strand, within CA264_02155 at 497.006 kb on + strand, within CA264_02155 at 497.022 kb on + strand, within CA264_02155 at 497.023 kb on - strand, within CA264_02155 at 497.053 kb on - strand, within CA264_02155 at 497.064 kb on + strand, within CA264_02155 at 497.065 kb on - strand, within CA264_02155 at 497.078 kb on + strand, within CA264_02155 at 497.079 kb on - strand, within CA264_02155 at 497.136 kb on + strand, within CA264_02155 at 497.136 kb on + strand, within CA264_02155 at 497.317 kb on + strand at 497.317 kb on + strand at 497.326 kb on + strand at 497.326 kb on + strand at 497.326 kb on + strand at 497.376 kb on + strand at 497.377 kb on - strand at 497.377 kb on - strand at 497.377 kb on - strand at 497.381 kb on + strand at 497.382 kb on - strand at 497.382 kb on - strand at 497.382 kb on - strand at 497.383 kb on + strand at 497.383 kb on + strand at 497.384 kb on - strand at 497.384 kb on - strand at 497.384 kb on - strand at 497.384 kb on - strand at 497.387 kb on - strand at 497.493 kb on - strand at 497.518 kb on + strand at 497.553 kb on + strand at 497.553 kb on + strand at 497.553 kb on + strand at 497.554 kb on - strand at 497.684 kb on + strand at 497.684 kb on + strand at 497.699 kb on + strand at 497.700 kb on - strand at 497.712 kb on + strand at 497.713 kb on - strand at 497.721 kb on - strand at 497.796 kb on + strand, within CA264_02160 at 497.796 kb on + strand, within CA264_02160 at 497.819 kb on + strand, within CA264_02160 at 497.822 kb on + strand, within CA264_02160 at 497.863 kb on - strand, within CA264_02160 at 497.863 kb on - strand, within CA264_02160 at 497.863 kb on - strand, within CA264_02160 at 497.863 kb on - strand, within CA264_02160 at 497.865 kb on - strand, within CA264_02160 at 497.886 kb on - strand, within CA264_02160 at 497.925 kb on - strand, within CA264_02160 at 497.965 kb on - strand, within CA264_02160 at 497.988 kb on - strand, within CA264_02160 at 497.988 kb on - strand, within CA264_02160 at 498.002 kb on + strand, within CA264_02160 at 498.003 kb on - strand, within CA264_02160 at 498.026 kb on + strand, within CA264_02160 at 498.027 kb on - strand, within CA264_02160 at 498.027 kb on - strand, within CA264_02160 at 498.027 kb on - strand, within CA264_02160 at 498.170 kb on + strand, within CA264_02160 at 498.307 kb on - strand at 498.307 kb on - strand at 498.316 kb on + strand at 498.317 kb on - strand at 498.322 kb on + strand at 498.322 kb on + strand at 498.340 kb on + strand at 498.341 kb on - strand at 498.361 kb on + strand at 498.481 kb on + strand at 498.483 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 496,803 + CA264_02155 0.57 -1.1 496,860 + CA264_02155 0.61 -3.4 496,862 + CA264_02155 0.61 -0.3 496,976 - CA264_02155 0.70 +0.3 497,004 + CA264_02155 0.72 -0.9 497,005 - CA264_02155 0.72 -0.4 497,006 + CA264_02155 0.72 -1.3 497,022 + CA264_02155 0.73 -1.8 497,023 - CA264_02155 0.73 -1.2 497,053 - CA264_02155 0.76 +0.2 497,064 + CA264_02155 0.76 -1.3 497,065 - CA264_02155 0.77 +0.5 497,078 + CA264_02155 0.78 -1.0 497,079 - CA264_02155 0.78 -0.7 497,136 + CA264_02155 0.82 -0.8 497,136 + CA264_02155 0.82 -0.2 497,317 + -1.5 497,317 + +1.5 497,326 + +0.7 497,326 + +0.0 497,326 + -0.9 497,376 + -0.5 497,377 - +1.8 497,377 - -0.7 497,377 - -0.5 497,381 + +0.5 497,382 - +0.4 497,382 - -0.0 497,382 - -1.2 497,383 + -1.4 497,383 + -0.6 497,384 - +0.3 497,384 - +0.0 497,384 - -0.2 497,384 - -0.8 497,387 - -1.1 497,493 - +1.1 497,518 + -0.8 497,553 + +0.9 497,553 + -1.4 497,553 + -1.6 497,554 - -1.5 497,684 + -0.6 497,684 + -1.4 497,699 + -0.7 497,700 - -1.3 497,712 + +0.9 497,713 - -1.7 497,721 - -1.4 497,796 + CA264_02160 0.17 -0.7 497,796 + CA264_02160 0.17 -1.5 497,819 + CA264_02160 0.21 +0.5 497,822 + CA264_02160 0.22 -1.4 497,863 - CA264_02160 0.29 -1.5 497,863 - CA264_02160 0.29 +0.9 497,863 - CA264_02160 0.29 +0.2 497,863 - CA264_02160 0.29 -0.8 497,865 - CA264_02160 0.29 +0.4 497,886 - CA264_02160 0.33 -1.4 497,925 - CA264_02160 0.40 -1.6 497,965 - CA264_02160 0.47 -1.5 497,988 - CA264_02160 0.51 -0.4 497,988 - CA264_02160 0.51 -2.1 498,002 + CA264_02160 0.54 -0.5 498,003 - CA264_02160 0.54 -1.0 498,026 + CA264_02160 0.58 +0.4 498,027 - CA264_02160 0.58 -1.4 498,027 - CA264_02160 0.58 -1.4 498,027 - CA264_02160 0.58 -1.4 498,170 + CA264_02160 0.83 -2.6 498,307 - +0.4 498,307 - -0.8 498,316 + +1.5 498,317 - -0.3 498,322 + +0.8 498,322 + -1.0 498,340 + -0.4 498,341 - +0.5 498,361 + -0.1 498,481 + -0.5 498,483 + -1.3
Or see this region's nucleotide sequence