Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00125 and CA264_00130 are separated by 30 nucleotides CA264_00130 and CA264_00135 are separated by 111 nucleotides CA264_00135 and CA264_00140 are separated by 242 nucleotides
CA264_00125: CA264_00125 - hypothetical protein, at 34,408 to 35,481
_00125
CA264_00130: CA264_00130 - glyoxalase, at 35,512 to 36,021
_00130
CA264_00135: CA264_00135 - transcriptional regulator, at 36,133 to 36,453
_00135
CA264_00140: CA264_00140 - hypothetical protein, at 36,696 to 36,908
_00140
Position (kb)
35
36
37 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 34.513 kb on - strand at 34.513 kb on - strand at 34.581 kb on - strand, within CA264_00125 at 34.590 kb on + strand, within CA264_00125 at 34.590 kb on + strand, within CA264_00125 at 34.590 kb on + strand, within CA264_00125 at 34.591 kb on - strand, within CA264_00125 at 34.591 kb on - strand, within CA264_00125 at 34.594 kb on - strand, within CA264_00125 at 34.613 kb on + strand, within CA264_00125 at 34.676 kb on - strand, within CA264_00125 at 34.734 kb on - strand, within CA264_00125 at 34.740 kb on + strand, within CA264_00125 at 34.740 kb on + strand, within CA264_00125 at 34.740 kb on + strand, within CA264_00125 at 34.740 kb on + strand, within CA264_00125 at 34.741 kb on - strand, within CA264_00125 at 34.741 kb on - strand, within CA264_00125 at 34.916 kb on + strand, within CA264_00125 at 34.916 kb on + strand, within CA264_00125 at 34.916 kb on + strand, within CA264_00125 at 34.917 kb on - strand, within CA264_00125 at 34.917 kb on - strand, within CA264_00125 at 34.921 kb on - strand, within CA264_00125 at 34.952 kb on + strand, within CA264_00125 at 34.953 kb on - strand, within CA264_00125 at 34.975 kb on + strand, within CA264_00125 at 34.990 kb on + strand, within CA264_00125 at 34.994 kb on + strand, within CA264_00125 at 34.994 kb on + strand, within CA264_00125 at 34.995 kb on - strand, within CA264_00125 at 35.009 kb on + strand, within CA264_00125 at 35.009 kb on + strand, within CA264_00125 at 35.010 kb on - strand, within CA264_00125 at 35.086 kb on + strand, within CA264_00125 at 35.086 kb on + strand, within CA264_00125 at 35.086 kb on + strand, within CA264_00125 at 35.086 kb on + strand, within CA264_00125 at 35.086 kb on + strand, within CA264_00125 at 35.087 kb on - strand, within CA264_00125 at 35.087 kb on - strand, within CA264_00125 at 35.087 kb on - strand, within CA264_00125 at 35.087 kb on - strand, within CA264_00125 at 35.167 kb on - strand, within CA264_00125 at 35.197 kb on - strand, within CA264_00125 at 35.412 kb on - strand at 35.412 kb on - strand at 35.437 kb on + strand at 35.438 kb on - strand at 35.440 kb on + strand at 35.441 kb on - strand at 35.475 kb on + strand at 35.475 kb on + strand at 35.481 kb on + strand at 35.481 kb on + strand at 35.481 kb on + strand at 35.482 kb on - strand at 35.486 kb on + strand at 35.486 kb on + strand at 35.486 kb on + strand at 35.486 kb on + strand at 35.487 kb on - strand at 35.507 kb on + strand at 35.517 kb on + strand at 35.517 kb on + strand at 35.517 kb on + strand at 35.518 kb on - strand at 35.522 kb on + strand at 35.537 kb on + strand at 35.537 kb on + strand at 35.561 kb on + strand at 35.593 kb on + strand, within CA264_00130 at 35.593 kb on + strand, within CA264_00130 at 35.594 kb on - strand, within CA264_00130 at 35.695 kb on - strand, within CA264_00130 at 35.695 kb on - strand, within CA264_00130 at 35.795 kb on - strand, within CA264_00130 at 35.860 kb on - strand, within CA264_00130 at 35.860 kb on - strand, within CA264_00130 at 35.915 kb on - strand, within CA264_00130 at 35.917 kb on - strand, within CA264_00130 at 35.917 kb on - strand, within CA264_00130 at 35.921 kb on + strand, within CA264_00130 at 36.186 kb on + strand, within CA264_00135 at 36.251 kb on + strand, within CA264_00135 at 36.483 kb on - strand at 36.490 kb on - strand at 36.543 kb on + strand at 36.569 kb on - strand at 36.632 kb on + strand at 36.640 kb on - strand at 36.672 kb on + strand at 36.673 kb on - strand at 36.673 kb on - strand at 36.693 kb on - strand at 36.694 kb on + strand at 36.694 kb on + strand at 36.695 kb on - strand at 36.721 kb on + strand, within CA264_00140 at 36.740 kb on + strand, within CA264_00140 at 36.748 kb on + strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.773 kb on - strand, within CA264_00140 at 36.791 kb on - strand, within CA264_00140 at 36.819 kb on + strand, within CA264_00140 at 36.868 kb on + strand, within CA264_00140 at 36.920 kb on - strand at 36.932 kb on + strand at 36.932 kb on + strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.934 kb on + strand at 36.935 kb on - strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.966 kb on - strand at 36.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 34,513 - +0.0 34,513 - -0.0 34,581 - CA264_00125 0.16 -1.3 34,590 + CA264_00125 0.17 -0.8 34,590 + CA264_00125 0.17 +1.6 34,590 + CA264_00125 0.17 -0.5 34,591 - CA264_00125 0.17 -1.3 34,591 - CA264_00125 0.17 +0.1 34,594 - CA264_00125 0.17 -0.1 34,613 + CA264_00125 0.19 -0.0 34,676 - CA264_00125 0.25 -0.6 34,734 - CA264_00125 0.30 -0.4 34,740 + CA264_00125 0.31 -0.4 34,740 + CA264_00125 0.31 -0.0 34,740 + CA264_00125 0.31 -0.2 34,740 + CA264_00125 0.31 -0.7 34,741 - CA264_00125 0.31 -0.1 34,741 - CA264_00125 0.31 +0.4 34,916 + CA264_00125 0.47 +0.3 34,916 + CA264_00125 0.47 +0.2 34,916 + CA264_00125 0.47 +1.6 34,917 - CA264_00125 0.47 -0.9 34,917 - CA264_00125 0.47 -0.9 34,921 - CA264_00125 0.48 -0.3 34,952 + CA264_00125 0.51 +0.0 34,953 - CA264_00125 0.51 -0.2 34,975 + CA264_00125 0.53 -0.2 34,990 + CA264_00125 0.54 -2.2 34,994 + CA264_00125 0.55 -0.5 34,994 + CA264_00125 0.55 -1.7 34,995 - CA264_00125 0.55 -0.4 35,009 + CA264_00125 0.56 -0.7 35,009 + CA264_00125 0.56 +0.0 35,010 - CA264_00125 0.56 -0.1 35,086 + CA264_00125 0.63 +0.5 35,086 + CA264_00125 0.63 -0.7 35,086 + CA264_00125 0.63 -0.3 35,086 + CA264_00125 0.63 -1.0 35,086 + CA264_00125 0.63 -0.5 35,087 - CA264_00125 0.63 -1.0 35,087 - CA264_00125 0.63 +2.1 35,087 - CA264_00125 0.63 +0.2 35,087 - CA264_00125 0.63 -0.4 35,167 - CA264_00125 0.71 +1.0 35,197 - CA264_00125 0.73 +0.3 35,412 - -0.6 35,412 - +0.0 35,437 + -0.1 35,438 - +0.6 35,440 + -1.3 35,441 - -0.3 35,475 + +0.6 35,475 + -0.6 35,481 + -0.3 35,481 + +0.6 35,481 + +0.1 35,482 - -0.6 35,486 + +0.7 35,486 + +0.6 35,486 + +0.1 35,486 + -1.0 35,487 - +0.6 35,507 + +0.4 35,517 + -0.9 35,517 + -1.2 35,517 + -0.5 35,518 - +0.8 35,522 + -1.6 35,537 + +0.0 35,537 + -1.6 35,561 + +0.2 35,593 + CA264_00130 0.16 -0.7 35,593 + CA264_00130 0.16 +0.8 35,594 - CA264_00130 0.16 +0.0 35,695 - CA264_00130 0.36 -1.1 35,695 - CA264_00130 0.36 -0.3 35,795 - CA264_00130 0.55 -0.2 35,860 - CA264_00130 0.68 -0.5 35,860 - CA264_00130 0.68 -1.7 35,915 - CA264_00130 0.79 -0.0 35,917 - CA264_00130 0.79 -1.0 35,917 - CA264_00130 0.79 -0.6 35,921 + CA264_00130 0.80 -0.8 36,186 + CA264_00135 0.17 +0.0 36,251 + CA264_00135 0.37 +0.0 36,483 - -0.7 36,490 - -0.8 36,543 + +0.2 36,569 - +1.2 36,632 + +1.4 36,640 - -0.3 36,672 + -0.0 36,673 - +0.1 36,673 - -0.2 36,693 - -1.5 36,694 + -1.0 36,694 + -1.9 36,695 - -0.4 36,721 + CA264_00140 0.12 -0.3 36,740 + CA264_00140 0.21 +1.1 36,748 + CA264_00140 0.24 +1.4 36,749 - CA264_00140 0.25 -0.8 36,749 - CA264_00140 0.25 +0.1 36,753 - CA264_00140 0.27 -0.5 36,753 - CA264_00140 0.27 -0.9 36,773 - CA264_00140 0.36 -2.0 36,791 - CA264_00140 0.45 +0.4 36,819 + CA264_00140 0.58 -0.3 36,868 + CA264_00140 0.81 +0.2 36,920 - -2.1 36,932 + -1.1 36,932 + -0.9 36,933 - -0.2 36,933 - -0.8 36,933 - -0.5 36,933 - +0.5 36,934 + +0.2 36,935 - +0.3 36,965 + -0.6 36,965 + -0.6 36,965 + -0.4 36,966 - -0.1 36,966 - -0.1
Or see this region's nucleotide sequence