Strain Fitness in Escherichia coli BW25113 around b3270

Experiment: Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
3,418,373	+	yhdX	b3269	0.18	-3.5
3,418,381	-	yhdX	b3269	0.19	+2.2
3,418,383	+	yhdX	b3269	0.19	-0.3
3,418,615	-	yhdX	b3269	0.39	+1.3
3,418,867	+	yhdX	b3269	0.60	-2.6
3,418,867	+	yhdX	b3269	0.60	-0.5
3,418,867	+	yhdX	b3269	0.60	-0.5
3,418,875	-	yhdX	b3269	0.61	+0.1
3,418,875	-	yhdX	b3269	0.61	-0.6
3,418,875	-	yhdX	b3269	0.61	+1.0
3,418,891	-	yhdX	b3269	0.62	-1.5
3,418,897	+	yhdX	b3269	0.63	-3.4
3,418,897	+	yhdX	b3269	0.63	-3.4
3,419,004	+	yhdX	b3269	0.72	-0.5
3,419,004	+	yhdX	b3269	0.72	-1.4
3,419,006	-	yhdX	b3269	0.72	+0.0
3,419,006	-	yhdX	b3269	0.72	-0.0
3,419,024	-	yhdX	b3269	0.73	+1.3
3,419,055	+	yhdX	b3269	0.76	+0.2
3,419,055	+	yhdX	b3269	0.76	-0.9
3,419,087	-	yhdX	b3269	0.79	-1.9
3,419,105	+	yhdX	b3269	0.80	-1.3
3,419,105	+	yhdX	b3269	0.80	-0.3
3,419,199	+	yhdX	b3269	0.88	-1.7
3,419,302	+				-0.2
3,419,302	+				-0.5
3,419,341	-				+0.8
3,419,418	-				-0.4
3,419,418	-				-3.1
3,419,462	-	yhdY	b3270	0.10	-3.2
3,419,462	-	yhdY	b3270	0.10	+1.9
3,419,500	+	yhdY	b3270	0.14	-2.0
3,419,578	+	yhdY	b3270	0.21	-1.5
3,419,578	+	yhdY	b3270	0.21	-3.1
3,419,578	+	yhdY	b3270	0.21	-1.8
3,419,580	-	yhdY	b3270	0.21	-0.5
3,419,580	-	yhdY	b3270	0.21	-2.9
3,419,671	+	yhdY	b3270	0.29	-0.4
3,419,671	+	yhdY	b3270	0.29	-1.4
3,419,671	+	yhdY	b3270	0.29	-0.6
3,419,671	+	yhdY	b3270	0.29	-2.6
3,419,674	-	yhdY	b3270	0.30	-1.4
3,419,674	-	yhdY	b3270	0.30	-2.7
3,419,741	+	yhdY	b3270	0.36	-2.3
3,419,805	-	yhdY	b3270	0.41	+1.2
3,419,814	+	yhdY	b3270	0.42	+0.6
3,419,868	+	yhdY	b3270	0.47	-0.5
3,419,881	+	yhdY	b3270	0.48	-0.9
3,419,911	-	yhdY	b3270	0.51	-2.6
3,419,911	-	yhdY	b3270	0.51	+0.3
3,419,979	+	yhdY	b3270	0.57	-0.3
3,420,064	-	yhdY	b3270	0.65	-0.2
3,420,083	-	yhdY	b3270	0.67	-3.1
3,420,117	+	yhdY	b3270	0.70	-0.0
3,420,256	+	yhdY	b3270	0.82	-1.7
3,420,306	+	yhdY	b3270	0.87	+1.3
3,420,423	+				-3.4
3,420,423	+				-4.1
3,420,431	-				-0.0
3,420,434	+				+0.6
3,420,434	+				-3.3
3,420,627	+	yhdZ	b3271	0.22	+0.8
3,420,627	+	yhdZ	b3271	0.22	+0.7
3,420,734	+	yhdZ	b3271	0.36	-0.9
3,420,764	-	yhdZ	b3271	0.40	-2.6
3,420,786	-	yhdZ	b3271	0.43	+0.4
3,420,846	+	yhdZ	b3271	0.51	+1.3
3,420,849	+	yhdZ	b3271	0.52	+1.4
3,420,857	-	yhdZ	b3271	0.53	-1.7
3,420,857	-	yhdZ	b3271	0.53	-2.1
3,420,857	-	yhdZ	b3271	0.53	-1.5
3,420,924	+	yhdZ	b3271	0.61	-1.8
3,421,053	-	yhdZ	b3271	0.78	-2.9
3,421,176	-				-3.2