Strain Fitness in Escherichia coli BW25113 around b2886

Experiment: Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
3,025,587	-	ygfQ	b4464	0.32	-0.3
3,025,589	+	ygfQ	b4464	0.33	+0.1
3,025,591	+	ygfQ	b4464	0.33	-3.9
3,025,599	-	ygfQ	b4464	0.33	-0.9
3,025,643	+	ygfQ	b4464	0.37	-1.7
3,025,755	-	ygfQ	b4464	0.45	-1.0
3,025,757	-	ygfQ	b4464	0.45	-3.8
3,025,863	-	ygfQ	b4464	0.53	+0.0
3,025,965	-	ygfQ	b4464	0.60	+0.0
3,025,965	-	ygfQ	b4464	0.60	-2.4
3,026,052	+	ygfQ	b4464	0.66	-0.7
3,026,088	+	ygfQ	b4464	0.69	+0.1
3,026,137	+	ygfQ	b4464	0.73	+1.9
3,026,137	+	ygfQ	b4464	0.73	-4.5
3,026,261	-				-1.2
3,026,261	-	ygfQ	b4464	0.82	-2.9
3,026,263	+	ygfQ	b4464	0.82	-0.1
3,026,321	+	ygfQ	b4464	0.86	+2.4
3,026,321	+	ygfQ	b4464	0.86	-0.8
3,026,331	+	ygfQ	b4464	0.87	+0.1
3,026,363	-	ygfQ	b4464	0.89	-0.1
3,026,414	-				-2.2
3,026,467	-				-3.2
3,026,623	+	ygfS	b2886	0.16	+0.2
3,026,641	+	ygfS	b2886	0.19	-1.0
3,026,662	+	ygfS	b2886	0.24	+0.9
3,026,705	+	ygfS	b2886	0.33	-1.9
3,026,723	-	ygfS	b2886	0.36	+0.5
3,026,800	-	ygfS	b2886	0.52	-2.9
3,026,800	-	ygfS	b2886	0.52	-0.9
3,026,812	-	ygfS	b2886	0.54	-1.0
3,026,853	+	ygfS	b2886	0.63	-1.1
3,026,947	+	ygfS	b2886	0.82	-3.5
3,026,947	+	ygfS	b2886	0.82	+0.4
3,027,136	-				-0.7
3,027,136	-				-0.3
3,027,184	-				-0.4
3,027,255	-	ygfT	b2887	0.12	+0.2
3,027,255	-	ygfT	b2887	0.12	+0.7
3,027,337	+	ygfT	b2887	0.16	+0.7
3,027,370	-	ygfT	b2887	0.17	+0.3
3,027,380	-	ygfT	b2887	0.18	-0.5
3,027,407	+	ygfT	b2887	0.19	+0.1
3,027,466	-	ygfT	b2887	0.23	-2.4
3,027,566	+	ygfT	b2887	0.28	-3.3
3,027,574	-	ygfT	b2887	0.28	+1.0
3,027,574	-	ygfT	b2887	0.28	-3.1
3,027,635	-	ygfT	b2887	0.31	-4.7
3,027,658	+	ygfT	b2887	0.33	+0.1
3,027,676	-	ygfT	b2887	0.33	-0.6
3,027,676	-	ygfT	b2887	0.33	-3.8
3,027,687	+	ygfT	b2887	0.34	-2.6
3,027,690	-	ygfT	b2887	0.34	-0.4
3,027,720	-	ygfT	b2887	0.36	-0.7
3,027,759	-	ygfT	b2887	0.38	-0.1
3,027,870	-	ygfT	b2887	0.44	-1.7
3,027,870	-	ygfT	b2887	0.44	-2.6
3,027,929	-	ygfT	b2887	0.47	+0.7
3,027,990	-	ygfT	b2887	0.50	+1.1
3,027,990	-	ygfT	b2887	0.50	-4.9
3,027,990	-	ygfT	b2887	0.50	+0.7