Strain Fitness in Escherichia coli BW25113 around b2051
Experiment: Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB |
|---|---|---|---|---|---|
| remove | |||||
| 2,123,290 | + | wcaI | b2050 | 0.61 | -1.4 |
| 2,123,290 | + | wcaI | b2050 | 0.61 | -1.0 |
| 2,123,479 | + | wcaI | b2050 | 0.76 | +0.1 |
| 2,123,610 | + | wcaI | b2050 | 0.87 | +0.7 |
| 2,123,668 | + | +0.3 | |||
| 2,123,822 | + | wcaH | b2051 | 0.11 | -1.6 |
| 2,124,177 | - | wcaH | b2051 | 0.85 | -2.1 |
| 2,124,282 | + | -0.4 | |||
| 2,124,282 | + | -1.9 | |||
| 2,124,465 | + | fcl | b2052 | 0.22 | +1.2 |
| 2,124,601 | + | fcl | b2052 | 0.36 | -0.9 |
| 2,124,630 | + | fcl | b2052 | 0.39 | +0.4 |
| 2,124,630 | + | fcl | b2052 | 0.39 | +0.3 |
| 2,124,722 | - | fcl | b2052 | 0.49 | -0.8 |
| 2,124,813 | - | fcl | b2052 | 0.58 | +1.0 |
| 2,124,848 | - | fcl | b2052 | 0.62 | -0.8 |
| 2,124,896 | + | fcl | b2052 | 0.67 | +0.7 |
| 2,124,951 | + | fcl | b2052 | 0.73 | -0.0 |
| 2,124,951 | + | fcl | b2052 | 0.73 | -1.0 |
| 2,125,046 | - | fcl | b2052 | 0.83 | +1.7 |
| 2,125,113 | + | fcl | b2052 | 0.89 | -0.1 |
| 2,125,189 | + | -3.3 | |||
| 2,125,221 | - | -2.4 |
Or see this region's nucleotide sequence