Strain Fitness in Escherichia coli BW25113 around b1753
Experiment: Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB |
---|---|---|---|---|---|
remove | |||||
1,832,682 | + | ydjY | b1751 | 0.80 | +0.9 |
1,832,707 | - | ydjY | b1751 | 0.84 | -1.3 |
1,833,245 | + | ydjZ | b1752 | 0.58 | -1.6 |
1,833,394 | - | ydjZ | b1752 | 0.79 | -0.5 |
1,833,430 | - | ydjZ | b1752 | 0.84 | +0.1 |
1,833,789 | + | ynjA | b1753 | 0.46 | -0.8 |
1,833,789 | + | ynjA | b1753 | 0.46 | -1.5 |
1,834,210 | + | -0.9 | |||
1,834,332 | - | b1754 | b1754 | 0.20 | -2.7 |
1,834,427 | + | b1754 | b1754 | 0.28 | -3.2 |
1,834,893 | + | b1754 | b1754 | 0.68 | +0.3 |
Or see this region's nucleotide sequence