Strain Fitness in Escherichia coli BW25113 around b1127

Experiment: Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
1,184,139	-	potA	b1126	0.40	-0.4
1,184,163	+	potA	b1126	0.42	-0.2
1,184,163	+	potA	b1126	0.42	+0.3
1,184,286	+	potA	b1126	0.53	+0.8
1,184,293	+	potA	b1126	0.54	+1.1
1,184,334	-	potA	b1126	0.57	+1.2
1,184,361	-	potA	b1126	0.60	+2.3
1,184,599	-	potA	b1126	0.81	+0.6
1,184,666	+	potA	b1126	0.87	-1.4
1,184,692	+	potA	b1126	0.89	+2.3
1,184,712	+				+1.7
1,184,724	+				+1.0
1,184,732	-				+0.4
1,184,847	+				-0.4
1,185,128	+				-2.2
1,185,135	-				-0.4
1,185,135	-				+0.2
1,185,153	+				-0.0
1,185,190	+	pepT	b1127	0.10	-1.0
1,185,276	+	pepT	b1127	0.17	-1.4
1,185,296	+	pepT	b1127	0.19	-0.4
1,185,409	+	pepT	b1127	0.28	-3.5
1,185,639	+	pepT	b1127	0.47	-1.2
1,185,647	+	pepT	b1127	0.47	-0.4
1,185,720	+	pepT	b1127	0.53	+0.2
1,185,746	-	pepT	b1127	0.55	-0.4
1,185,779	-	pepT	b1127	0.58	-1.8
1,185,886	+	pepT	b1127	0.67	-2.6
1,185,986	-	pepT	b1127	0.75	+0.3
1,186,009	+	pepT	b1127	0.77	+0.2
1,186,182	-				+0.7
1,186,468	-	ycfD	b1128	0.11	-0.6
1,186,507	-	ycfD	b1128	0.15	+0.8
1,186,533	-	ycfD	b1128	0.17	-0.6
1,186,778	+	ycfD	b1128	0.39	+1.2
1,186,778	+	ycfD	b1128	0.39	-0.3
1,186,805	-	ycfD	b1128	0.41	-1.1
1,186,876	-	ycfD	b1128	0.48	-0.0
1,186,942	-	ycfD	b1128	0.53	+0.2
1,186,950	+	ycfD	b1128	0.54	+2.2
1,186,950	+	ycfD	b1128	0.54	-1.0
1,187,202	+	ycfD	b1128	0.77	-1.3
1,187,292	+	ycfD	b1128	0.85	+0.6
1,187,292	+	ycfD	b1128	0.85	+0.5