Experiment: D-Glucose (C) pH 7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4498 and PP_4499 overlap by 37 nucleotides PP_4499 and PP_4500 overlap by 23 nucleotides PP_4500 and PP_4501 are separated by 67 nucleotides PP_4501 and PP_4502 overlap by 32 nucleotides
PP_4498: PP_4498 - Segregation and condensation protein A, at 5,113,431 to 5,114,318
_4498
PP_4499: PP_4499 - putative maturation enzyme, at 5,114,282 to 5,114,947
_4499
PP_4500: PP_4500 - TrpH family protein, at 5,114,925 to 5,115,785
_4500
PP_4501: PP_4501 - Probable intracellular septation protein A, at 5,115,853 to 5,116,446
_4501
PP_4502: PP_4502 - putative enzyme, at 5,116,415 to 5,116,747
_4502
Position (kb)
5114
5115
5116 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5113.991 kb on - strand, within PP_4498 at 5114.013 kb on + strand, within PP_4498 at 5114.014 kb on - strand, within PP_4498 at 5114.014 kb on - strand, within PP_4498 at 5114.035 kb on + strand, within PP_4498 at 5114.035 kb on + strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.044 kb on + strand at 5114.044 kb on + strand, within PP_4498 at 5114.044 kb on + strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.107 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.174 kb on - strand, within PP_4498 at 5114.174 kb on - strand, within PP_4498 at 5114.209 kb on + strand, within PP_4498 at 5114.561 kb on - strand, within PP_4499 at 5114.679 kb on + strand, within PP_4499 at 5114.680 kb on - strand, within PP_4499 at 5114.780 kb on + strand, within PP_4499 at 5114.780 kb on + strand, within PP_4499 at 5114.862 kb on - strand, within PP_4499 at 5114.913 kb on + strand at 5114.913 kb on + strand at 5114.914 kb on - strand at 5115.149 kb on + strand, within PP_4500 at 5115.150 kb on - strand, within PP_4500 at 5115.150 kb on - strand, within PP_4500 at 5115.150 kb on - strand, within PP_4500 at 5115.151 kb on + strand, within PP_4500 at 5115.151 kb on + strand, within PP_4500 at 5115.193 kb on + strand, within PP_4500 at 5115.193 kb on + strand, within PP_4500 at 5115.194 kb on - strand, within PP_4500 at 5115.785 kb on + strand at 5115.785 kb on + strand at 5115.818 kb on + strand at 5115.818 kb on + strand at 5115.818 kb on + strand at 5115.818 kb on + strand at 5115.819 kb on - strand at 5115.821 kb on + strand at 5116.425 kb on + strand at 5116.425 kb on + strand at 5116.426 kb on - strand at 5116.426 kb on - strand at 5116.454 kb on + strand, within PP_4502 at 5116.621 kb on + strand, within PP_4502 at 5116.685 kb on + strand, within PP_4502 at 5116.685 kb on + strand at 5116.686 kb on - strand, within PP_4502 at 5116.686 kb on - strand, within PP_4502 at 5116.686 kb on - strand, within PP_4502 at 5116.703 kb on + strand, within PP_4502 at 5116.737 kb on + strand at 5116.738 kb on - strand at 5116.738 kb on - strand at 5116.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) pH 7 remove 5,113,991 - PP_4498 0.63 +0.3 5,114,013 + PP_4498 0.66 -0.4 5,114,014 - PP_4498 0.66 +0.4 5,114,014 - PP_4498 0.66 +1.5 5,114,035 + PP_4498 0.68 +1.7 5,114,035 + PP_4498 0.68 +0.9 5,114,036 - PP_4498 0.68 +1.0 5,114,036 - PP_4498 0.68 -1.2 5,114,036 - PP_4498 0.68 -0.5 5,114,044 + -0.3 5,114,044 + PP_4498 0.69 +0.2 5,114,044 + PP_4498 0.69 -2.2 5,114,045 - PP_4498 0.69 +2.0 5,114,045 - PP_4498 0.69 -0.6 5,114,045 - PP_4498 0.69 -0.3 5,114,045 - PP_4498 0.69 -0.2 5,114,087 + PP_4498 0.74 -0.6 5,114,087 + PP_4498 0.74 +2.0 5,114,087 + PP_4498 0.74 +0.7 5,114,087 + PP_4498 0.74 +0.1 5,114,107 + PP_4498 0.76 +0.0 5,114,173 + PP_4498 0.84 -0.5 5,114,173 + PP_4498 0.84 -2.0 5,114,173 + PP_4498 0.84 +0.5 5,114,174 - PP_4498 0.84 +1.8 5,114,174 - PP_4498 0.84 -0.8 5,114,209 + PP_4498 0.88 +0.0 5,114,561 - PP_4499 0.42 +0.0 5,114,679 + PP_4499 0.60 +0.5 5,114,680 - PP_4499 0.60 -0.1 5,114,780 + PP_4499 0.75 -0.8 5,114,780 + PP_4499 0.75 +0.6 5,114,862 - PP_4499 0.87 -0.3 5,114,913 + -1.2 5,114,913 + +0.4 5,114,914 - +0.0 5,115,149 + PP_4500 0.26 -1.2 5,115,150 - PP_4500 0.26 +0.0 5,115,150 - PP_4500 0.26 -0.4 5,115,150 - PP_4500 0.26 -1.1 5,115,151 + PP_4500 0.26 +0.7 5,115,151 + PP_4500 0.26 +0.0 5,115,193 + PP_4500 0.31 -0.9 5,115,193 + PP_4500 0.31 -0.9 5,115,194 - PP_4500 0.31 +0.0 5,115,785 + -0.2 5,115,785 + +0.6 5,115,818 + +0.0 5,115,818 + -0.3 5,115,818 + -1.0 5,115,818 + -1.1 5,115,819 - -0.8 5,115,821 + +0.0 5,116,425 + -1.0 5,116,425 + +0.2 5,116,426 - -0.7 5,116,426 - +0.4 5,116,454 + PP_4502 0.12 -0.1 5,116,621 + PP_4502 0.62 -0.3 5,116,685 + PP_4502 0.81 +0.5 5,116,685 + +2.0 5,116,686 - PP_4502 0.81 -0.8 5,116,686 - PP_4502 0.81 -1.4 5,116,686 - PP_4502 0.81 +0.9 5,116,703 + PP_4502 0.86 -1.7 5,116,737 + +0.7 5,116,738 - +1.0 5,116,738 - +1.0 5,116,774 - -0.9
Or see this region's nucleotide sequence