Strain Fitness in Pseudomonas putida KT2440 around PP_4214

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
4,760,416	+		PP_4213	0.34	-1.4
4,760,488	+		PP_4213	0.40	-1.2
4,760,488	+		PP_4213	0.40	+0.8
4,760,488	+		PP_4213	0.40	+0.3
4,760,875	+		PP_4213	0.67	+1.3
4,761,104	+		PP_4213	0.84	+0.5
4,761,104	+		PP_4213	0.84	-0.4
4,761,240	+				-0.2
4,761,732	+		PP_4214	0.30	+1.7
4,761,789	+		PP_4214	0.35	+0.9
4,761,789	+		PP_4214	0.35	+0.5
4,761,813	+		PP_4214	0.37	+1.1
4,761,850	+		PP_4214	0.39	+1.5
4,761,851	-		PP_4214	0.40	+1.9
4,761,892	+		PP_4214	0.43	-1.2
4,761,895	+		PP_4214	0.43	+0.9
4,762,263	+		PP_4214	0.72	+0.3
4,762,365	+		PP_4214	0.79	+1.3
4,762,480	+		PP_4214	0.88	+0.4
4,762,481	-				-0.7
4,762,657	+				+1.2
4,762,945	+		PP_4215	0.31	-0.1
4,762,975	+		PP_4215	0.34	+1.9
4,762,975	+		PP_4215	0.34	-0.1
4,762,975	+		PP_4215	0.34	+0.5
4,762,975	+		PP_4215	0.34	+1.4
4,762,975	+		PP_4215	0.34	+1.7
4,762,976	-				+1.9
4,763,053	+		PP_4215	0.43	+0.3
4,763,053	+		PP_4215	0.43	-2.2
4,763,053	+		PP_4215	0.43	+0.2
4,763,053	+		PP_4215	0.43	-2.2
4,763,110	+		PP_4215	0.49	-0.7
4,763,110	+		PP_4215	0.49	+0.1
4,763,338	+		PP_4215	0.75	+0.2
4,763,338	+		PP_4215	0.75	-0.2
4,763,339	-		PP_4215	0.75	-0.7
4,763,359	+		PP_4215	0.77	+1.6
4,763,359	+		PP_4215	0.77	+1.0
4,763,359	+		PP_4215	0.77	-0.2