Strain Fitness in Pseudomonas putida KT2440 around PP_2784

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
3,170,743	+				+0.2
3,170,743	+				+0.5
3,170,743	+				-0.5
3,170,744	-				+0.6
3,170,806	+				+1.3
3,170,827	+				+0.0
3,170,827	+				+0.1
3,170,828	-				+1.4
3,170,828	-				+1.1
3,170,888	-				-0.9
3,170,984	-				+0.1
3,171,008	+				+0.4
3,171,473	+		PP_2783	0.65	-0.5
3,171,661	+				+0.2
3,171,661	+				-0.3
3,171,682	+				+0.2
3,171,682	+				-0.7
3,171,683	-				+0.1
3,171,739	+				+0.5
3,171,739	+				+0.1
3,172,074	+		PP_2784	0.45	-0.1
3,172,074	+		PP_2784	0.45	+1.3
3,172,075	-		PP_2784	0.45	+1.0
3,172,173	+		PP_2784	0.58	+0.7
3,172,492	-				+3.5
3,172,492	-				-0.9
3,172,658	+		PP_2785	0.13	+0.6
3,172,700	+		PP_2785	0.16	-0.1
3,172,754	+		PP_2785	0.20	+0.5
3,172,754	+		PP_2785	0.20	+1.1
3,172,754	+		PP_2785	0.20	+0.8
3,172,884	+		PP_2785	0.30	-0.5
3,172,884	+		PP_2785	0.30	-0.4