Strain Fitness in Pseudomonas putida KT2440 around PP_2759

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
3,142,194	+		PP_2758	0.14	+0.6
3,142,194	+		PP_2758	0.14	-0.2
3,142,194	+		PP_2758	0.14	+1.3
3,142,194	+		PP_2758	0.14	+0.1
3,142,195	-		PP_2758	0.14	-0.1
3,142,195	-		PP_2758	0.14	-0.0
3,142,247	+		PP_2758	0.19	-0.3
3,142,248	-		PP_2758	0.19	-1.1
3,142,287	+		PP_2758	0.23	+2.0
3,142,390	+		PP_2758	0.33	+1.1
3,142,390	+		PP_2758	0.33	-1.0
3,142,391	-		PP_2758	0.33	-0.8
3,142,599	-		PP_2758	0.53	-0.3
3,142,599	-		PP_2758	0.53	+0.5
3,142,599	-		PP_2758	0.53	-1.0
3,142,751	+		PP_2758	0.68	-0.9
3,142,751	+		PP_2758	0.68	+0.5
3,142,844	-		PP_2758	0.77	+0.6
3,142,853	+		PP_2758	0.78	+2.4
3,142,854	-		PP_2758	0.78	+0.3
3,143,212	-				-1.1
3,143,461	+		PP_2759	0.25	+3.1
3,143,461	+		PP_2759	0.25	-0.6
3,143,665	+		PP_2759	0.38	+0.9
3,143,677	+		PP_2759	0.39	+0.4
3,144,382	+		PP_2759	0.85	+0.5
3,144,592	+				-1.3
3,144,593	-				+0.1
3,144,593	-				+0.2
3,144,593	-				-0.9
3,144,598	+				-0.2
3,144,598	+				+0.3
3,144,598	+				-0.4
3,144,599	-				+0.4
3,144,609	+				+0.1
3,144,744	+				+1.3
3,144,745	-		PP_2760	0.15	-0.1
3,145,178	+		PP_2760	0.59	-0.7
3,145,178	+		PP_2760	0.59	+0.0
3,145,202	+				-0.3
3,145,202	+		PP_2760	0.62	-0.9
3,145,232	-		PP_2760	0.65	+0.3
3,145,259	+		PP_2760	0.68	+0.2
3,145,274	+		PP_2760	0.69	-0.3
3,145,274	+		PP_2760	0.69	-1.8
3,145,275	-		PP_2760	0.69	-1.6