Strain Fitness in Pseudomonas putida KT2440 around PP_1898

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
2,141,622	+		PP_1897	0.61	+1.7
2,141,622	+		PP_1897	0.61	+1.3
2,141,622	+		PP_1897	0.61	-2.7
2,141,622	+		PP_1897	0.61	-1.0
2,141,623	-		PP_1897	0.61	+0.2
2,141,623	-		PP_1897	0.61	+0.4
2,141,623	-		PP_1897	0.61	-0.1
2,141,623	-		PP_1897	0.61	+0.0
2,141,623	-		PP_1897	0.61	+0.0
2,141,685	+		PP_1897	0.64	-0.0
2,141,786	-		PP_1897	0.69	-0.4
2,141,807	+		PP_1897	0.70	+0.3
2,141,807	+		PP_1897	0.70	-0.3
2,141,808	-		PP_1897	0.70	-0.0
2,141,808	-		PP_1897	0.70	+1.1
2,141,808	-		PP_1897	0.70	+0.4
2,142,092	-		PP_1897	0.83	-0.3
2,142,092	-		PP_1897	0.83	-0.8
2,142,092	-		PP_1897	0.83	+0.5
2,142,092	-		PP_1897	0.83	-0.1
2,142,155	-		PP_1897	0.85	+0.8
2,142,288	+				-0.1
2,142,350	+				+0.1
2,142,427	-				-1.5
2,142,427	-				+0.7
2,142,549	+				-0.2
2,142,554	+				+0.4
2,142,554	+				+0.0
2,142,585	+				-0.1
2,142,660	+		PP_1898	0.16	+2.3
2,142,728	+		PP_1898	0.26	+2.9
2,142,728	+		PP_1898	0.26	+0.5
2,142,904	+		PP_1898	0.52	-0.5
2,143,041	+		PP_1898	0.73	+0.8
2,143,086	+		PP_1898	0.79	+0.7
2,143,316	+		PP_1899	0.22	-0.0