Strain Fitness in Pseudomonas putida KT2440 around PP_1824

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
2,048,952	+		PP_1822	0.14	-0.6
2,048,952	+		PP_1822	0.14	+0.1
2,048,952	+		PP_1822	0.14	-0.0
2,048,952	+		PP_1822	0.14	-0.6
2,048,952	+		PP_1822	0.14	+1.1
2,048,952	+		PP_1822	0.14	-0.3
2,048,953	-		PP_1822	0.14	-0.4
2,048,953	-		PP_1822	0.14	-1.0
2,048,953	-		PP_1822	0.14	+0.4
2,048,953	-		PP_1822	0.14	+0.0
2,049,990	+				+0.0
2,049,990	+				-0.7
2,049,990	+				+0.6
2,050,316	+		PP_1824	0.66	+0.7
2,050,316	+		PP_1824	0.66	+0.8
2,050,461	-				-0.3
2,050,521	-				+0.8
2,050,593	+				+0.1
2,050,717	+		PP_1825	0.11	+0.1
2,050,718	-		PP_1825	0.11	-0.1
2,050,851	+		PP_1825	0.53	-0.1
2,050,852	-		PP_1825	0.53	+0.0
2,050,893	-		PP_1825	0.66	-0.4
2,050,948	+		PP_1825	0.83	+0.1
2,050,993	+				-0.1
2,050,994	-				-0.5
2,050,994	-				-0.3
2,050,994	-				+0.1
2,050,994	-				+0.9
2,051,243	-		PP_1826	0.26	-0.3
2,051,501	+		PP_1826	0.70	-0.9