Experiment: D-Glucose (C) pH 7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0748 and PP_0749 are separated by 51 nucleotides PP_0749 and PP_0750 are separated by 44 nucleotides PP_0750 and PP_0751 are separated by 176 nucleotides
PP_0748: PP_0748 - conserved protein of unknown function, at 866,548 to 867,021
_0748
PP_0749: PP_0749 - conserved exported protein of unknown function, at 867,073 to 867,543
_0749
PP_0750: PP_0750 - conserved protein of unknown function, at 867,588 to 867,902
_0750
PP_0751: PP_0751 - malate:quinone oxidoreductase, at 868,079 to 869,587
_0751
Position (kb) 867
868 Strain fitness (log2 ratio) -1
0
1
2
3 at 866.647 kb on - strand, within PP_0748 at 866.695 kb on + strand, within PP_0748 at 866.696 kb on - strand, within PP_0748 at 866.696 kb on - strand, within PP_0748 at 866.857 kb on - strand, within PP_0748 at 866.857 kb on - strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.860 kb on + strand, within PP_0748 at 866.861 kb on - strand, within PP_0748 at 866.861 kb on - strand, within PP_0748 at 866.861 kb on - strand, within PP_0748 at 866.861 kb on - strand, within PP_0748 at 866.990 kb on - strand at 867.031 kb on + strand at 867.032 kb on - strand at 867.043 kb on + strand at 867.044 kb on - strand at 867.059 kb on - strand at 867.215 kb on - strand, within PP_0749 at 867.215 kb on - strand, within PP_0749 at 867.227 kb on + strand, within PP_0749 at 867.382 kb on + strand, within PP_0749 at 867.382 kb on + strand, within PP_0749 at 867.382 kb on + strand, within PP_0749 at 867.382 kb on + strand, within PP_0749 at 867.382 kb on + strand, within PP_0749 at 867.383 kb on - strand, within PP_0749 at 867.383 kb on - strand, within PP_0749 at 867.383 kb on - strand, within PP_0749 at 867.383 kb on - strand, within PP_0749 at 867.431 kb on - strand, within PP_0749 at 867.534 kb on + strand at 867.534 kb on + strand at 867.535 kb on - strand at 867.535 kb on - strand at 867.535 kb on - strand at 867.535 kb on - strand at 867.617 kb on + strand at 867.617 kb on + strand at 867.634 kb on + strand, within PP_0750 at 867.660 kb on + strand, within PP_0750 at 867.660 kb on + strand at 867.660 kb on + strand, within PP_0750 at 867.661 kb on - strand, within PP_0750 at 867.661 kb on - strand, within PP_0750 at 867.736 kb on - strand, within PP_0750 at 867.773 kb on - strand, within PP_0750 at 867.773 kb on - strand, within PP_0750 at 867.871 kb on - strand at 867.871 kb on - strand at 867.871 kb on - strand at 867.871 kb on - strand at 867.887 kb on + strand at 867.887 kb on + strand at 867.888 kb on - strand at 867.888 kb on - strand at 868.014 kb on + strand at 868.080 kb on + strand at 868.080 kb on + strand at 868.087 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) pH 7 remove 866,647 - PP_0748 0.21 -0.4 866,695 + PP_0748 0.31 -0.7 866,696 - PP_0748 0.31 +2.2 866,696 - PP_0748 0.31 -1.1 866,857 - PP_0748 0.65 +0.1 866,857 - PP_0748 0.65 -0.5 866,860 + PP_0748 0.66 +3.2 866,860 + PP_0748 0.66 +0.2 866,860 + PP_0748 0.66 +1.2 866,860 + +1.8 866,860 + PP_0748 0.66 +0.1 866,860 + PP_0748 0.66 -1.0 866,860 + PP_0748 0.66 -0.2 866,860 + PP_0748 0.66 -1.2 866,860 + PP_0748 0.66 +0.7 866,860 + PP_0748 0.66 -0.2 866,861 - PP_0748 0.66 -0.3 866,861 - PP_0748 0.66 -0.0 866,861 - PP_0748 0.66 +0.2 866,861 - PP_0748 0.66 +0.4 866,990 - -0.1 867,031 + +1.1 867,032 - -0.1 867,043 + +0.2 867,044 - +1.8 867,059 - -0.8 867,215 - PP_0749 0.30 +0.9 867,215 - PP_0749 0.30 +0.5 867,227 + PP_0749 0.33 +0.3 867,382 + PP_0749 0.66 +1.2 867,382 + PP_0749 0.66 +0.5 867,382 + PP_0749 0.66 -0.2 867,382 + PP_0749 0.66 -0.8 867,382 + PP_0749 0.66 -1.4 867,383 - PP_0749 0.66 -1.1 867,383 - PP_0749 0.66 +0.6 867,383 - PP_0749 0.66 -1.3 867,383 - PP_0749 0.66 -0.4 867,431 - PP_0749 0.76 +0.5 867,534 + -0.2 867,534 + -0.8 867,535 - -0.3 867,535 - +0.2 867,535 - -0.1 867,535 - -0.2 867,617 + +1.0 867,617 + +0.5 867,634 + PP_0750 0.15 +0.5 867,660 + PP_0750 0.23 +0.1 867,660 + +2.9 867,660 + PP_0750 0.23 +0.2 867,661 - PP_0750 0.23 -1.0 867,661 - PP_0750 0.23 +0.4 867,736 - PP_0750 0.47 +1.2 867,773 - PP_0750 0.59 +0.2 867,773 - PP_0750 0.59 +0.5 867,871 - -1.1 867,871 - +0.3 867,871 - -0.5 867,871 - -0.1 867,887 + +1.4 867,887 + +0.6 867,888 - -0.2 867,888 - +0.3 868,014 + +0.7 868,080 + +0.1 868,080 + +1.0 868,087 - +0.6
Or see this region's nucleotide sequence