Strain Fitness in Pseudomonas putida KT2440 around PP_5017

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
5,714,395	-		PP_5014	0.38	-0.4
5,714,494	+		PP_5014	0.63	+1.4
5,714,523	-		PP_5014	0.70	+0.8
5,714,556	+		PP_5014	0.79	-3.7
5,714,557	-		PP_5014	0.79	-0.6
5,714,565	+		PP_5014	0.81	-2.1
5,714,566	-		PP_5014	0.81	+0.8
5,714,566	-		PP_5014	0.81	-0.8
5,714,622	+				+0.1
5,714,623	-				-3.0
5,714,623	-				-0.2
5,714,710	+		PP_5015	0.21	-4.2
5,714,710	+		PP_5015	0.21	-2.3
5,714,710	+		PP_5015	0.21	-2.5
5,714,710	+		PP_5015	0.21	-4.1
5,714,711	-		PP_5015	0.21	-1.3
5,714,711	-		PP_5015	0.21	-1.5
5,714,725	+				+0.0
5,714,818	+		PP_5015	0.53	-4.5
5,714,834	-		PP_5015	0.57	-0.8
5,715,026	+				+0.7
5,715,033	+				-0.7
5,715,564	+		PP_5017	0.61	+1.1
5,715,564	+				+1.4