Strain Fitness in Pseudomonas putida KT2440 around PP_4982

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
5,674,639	+				+0.0
5,674,639	+				+0.7
5,674,640	-				-0.4
5,674,640	-				-0.3
5,674,645	+				-2.1
5,674,645	+				-0.3
5,674,646	-				-0.1
5,674,671	-				-1.5
5,674,779	+				+0.4
5,674,780	-				-1.2
5,674,807	+				+0.7
5,674,808	-				+1.7
5,675,050	-		PP_4981	0.44	-0.1
5,675,203	+		PP_4981	0.69	+0.5
5,675,221	-		PP_4981	0.72	-0.3
5,675,373	+				+0.4
5,675,374	-				+0.4
5,675,615	+		PP_4982	0.41	+0.1
5,675,648	+		PP_4982	0.47	+0.6
5,675,649	-		PP_4982	0.47	+0.9
5,675,649	-		PP_4982	0.47	+0.0
5,675,649	-		PP_4982	0.47	+1.8
5,675,819	+		PP_4982	0.78	-1.1
5,675,819	+		PP_4982	0.78	+2.0
5,675,823	-		PP_4982	0.79	-0.2
5,675,964	+				+0.4
5,675,964	+				-0.8
5,675,964	+				+0.1
5,675,965	-				-0.1
5,675,965	-				-1.2
5,675,987	+				+0.8
5,676,047	+				+1.3
5,676,048	-				-0.4
5,676,048	-				-0.4
5,676,059	-				+0.5
5,676,069	+				-2.1
5,676,070	-				-0.4
5,676,070	-				+0.4
5,676,087	+				+0.0
5,676,240	+				-0.6
5,676,240	+				+2.0
5,676,541	-		PP_4983	0.21	+0.4
5,676,770	+		PP_4983	0.34	+0.0
5,676,770	+		PP_4983	0.34	-0.7
5,676,775	-		PP_4983	0.34	+0.5
5,676,795	-		PP_4983	0.35	-0.4
5,676,878	+		PP_4983	0.39	-1.2