Strain Fitness in Pseudomonas putida KT2440 around PP_2798

Experiment: D-Glucose (C) pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 7
3,187,414	-		PP_2797	0.62	+0.0
3,187,552	+		PP_2797	0.70	-1.1
3,187,553	-		PP_2797	0.70	-0.1
3,187,553	-		PP_2797	0.70	-0.3
3,187,643	+		PP_2797	0.76	+1.4
3,187,882	-				-0.1
3,187,882	-				+0.5
3,187,882	-				-0.8
3,188,087	+				-1.2
3,188,095	+				+0.9
3,188,095	+				+0.4
3,188,096	-				+0.9
3,188,098	+				+0.4
3,188,099	-				-0.1
3,188,187	+				-0.5
3,188,246	+				-0.7
3,188,247	-				+0.4
3,188,266	+				+0.2
3,188,268	+				-0.2
3,188,268	+				+0.2
3,188,269	-				-1.2
3,188,269	-				-1.1
3,188,269	-				-0.1
3,188,269	-				+0.3
3,188,721	+		PP_2798	0.46	+0.8
3,188,822	+		PP_2798	0.57	-0.0
3,188,830	+		PP_2798	0.58	+0.5
3,188,830	+		PP_2798	0.58	-0.6
3,188,846	+		PP_2798	0.60	+2.9
3,188,912	+		PP_2798	0.67	+0.8
3,188,925	+		PP_2798	0.68	+0.5
3,188,925	+		PP_2798	0.68	+0.4
3,189,240	-				-1.5
3,189,247	+				+1.0
3,189,248	-				-1.8
3,189,443	-		PP_2799	0.13	+0.6
3,189,729	+		PP_2799	0.33	+0.8
3,189,729	+		PP_2799	0.33	-0.6
3,189,775	+		PP_2799	0.37	-0.8
3,189,776	-		PP_2799	0.37	-0.1
3,189,776	-		PP_2799	0.37	-0.2
3,189,827	-		PP_2799	0.40	-0.1
3,189,934	+		PP_2799	0.48	+0.8
3,190,023	-		PP_2799	0.55	-0.6
3,190,023	-		PP_2799	0.55	-0.6
3,190,024	+		PP_2799	0.55	+1.0
3,190,024	+		PP_2799	0.55	-1.4
3,190,024	+		PP_2799	0.55	-0.3
3,190,025	-		PP_2799	0.55	+0.1
3,190,025	-		PP_2799	0.55	-0.1
3,190,025	-		PP_2799	0.55	+0.4
3,190,056	-		PP_2799	0.57	+0.5
3,190,056	-		PP_2799	0.57	+0.4
3,190,201	+		PP_2799	0.67	-0.6