Experiment: D-Glucose (C) pH 7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_1644 and PP_1645 overlap by 4 nucleotides PP_1645 and PP_1646 are separated by 85 nucleotides PP_1646 and PP_1647 are separated by 35 nucleotides PP_1647 and PP_1648 overlap by 31 nucleotides PP_1648 and PP_1649 are separated by 31 nucleotides
PP_1644: PP_1644 - NAD(P)H dehydrogenase (quinone), at 1,838,563 to 1,839,168
_1644
PP_1645: PP_1645 - putative enzyme, at 1,839,165 to 1,839,518
_1645
PP_1646: PP_1646 - putative Thioredoxin, at 1,839,604 to 1,840,068
_1646
PP_1647: PP_1647 - conserved protein of unknown function, at 1,840,104 to 1,840,535
_1647
PP_1648: PP_1648 - conserved protein of unknown function, at 1,840,505 to 1,840,942
_1648
PP_1649: PP_1649 - D-lactate dehydrogenase, at 1,840,974 to 1,842,002
_1649
Position (kb) 1839
1840
1841 Strain fitness (log2 ratio) -1
0
1
2 at 1838.691 kb on - strand, within PP_1644 at 1838.691 kb on - strand, within PP_1644 at 1838.736 kb on - strand, within PP_1644 at 1838.900 kb on + strand, within PP_1644 at 1838.901 kb on - strand, within PP_1644 at 1838.901 kb on - strand, within PP_1644 at 1838.947 kb on + strand, within PP_1644 at 1838.948 kb on - strand, within PP_1644 at 1838.987 kb on + strand, within PP_1644 at 1839.043 kb on - strand, within PP_1644 at 1839.043 kb on - strand, within PP_1644 at 1839.137 kb on + strand at 1839.138 kb on - strand at 1839.138 kb on - strand at 1839.140 kb on + strand at 1839.141 kb on - strand at 1839.156 kb on - strand at 1839.320 kb on + strand, within PP_1645 at 1839.320 kb on + strand, within PP_1645 at 1839.320 kb on + strand, within PP_1645 at 1839.320 kb on + strand, within PP_1645 at 1839.321 kb on - strand, within PP_1645 at 1839.321 kb on - strand, within PP_1645 at 1839.321 kb on - strand, within PP_1645 at 1839.322 kb on + strand, within PP_1645 at 1839.323 kb on - strand, within PP_1645 at 1839.418 kb on + strand, within PP_1645 at 1839.419 kb on - strand, within PP_1645 at 1839.494 kb on + strand at 1839.495 kb on - strand at 1839.500 kb on - strand at 1839.500 kb on - strand at 1839.554 kb on + strand at 1839.555 kb on - strand at 1839.555 kb on - strand at 1839.627 kb on - strand at 1839.693 kb on + strand, within PP_1646 at 1839.696 kb on + strand, within PP_1646 at 1839.697 kb on - strand, within PP_1646 at 1839.697 kb on - strand, within PP_1646 at 1839.697 kb on - strand, within PP_1646 at 1839.970 kb on + strand, within PP_1646 at 1840.192 kb on - strand, within PP_1647 at 1840.340 kb on - strand, within PP_1647 at 1840.381 kb on + strand, within PP_1647 at 1840.382 kb on - strand, within PP_1647 at 1840.420 kb on + strand, within PP_1647 at 1840.421 kb on - strand, within PP_1647 at 1840.421 kb on - strand, within PP_1647 at 1840.921 kb on - strand at 1840.969 kb on + strand at 1840.970 kb on - strand at 1840.976 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) pH 7 remove 1,838,691 - PP_1644 0.21 +0.6 1,838,691 - PP_1644 0.21 +0.0 1,838,736 - PP_1644 0.29 -0.3 1,838,900 + PP_1644 0.56 -1.6 1,838,901 - PP_1644 0.56 +0.2 1,838,901 - PP_1644 0.56 -1.2 1,838,947 + PP_1644 0.63 -0.8 1,838,948 - PP_1644 0.64 -0.4 1,838,987 + PP_1644 0.70 -0.5 1,839,043 - PP_1644 0.79 +1.8 1,839,043 - PP_1644 0.79 +0.7 1,839,137 + -1.3 1,839,138 - -0.1 1,839,138 - -0.3 1,839,140 + -0.0 1,839,141 - -1.3 1,839,156 - +0.1 1,839,320 + PP_1645 0.44 -1.7 1,839,320 + PP_1645 0.44 -0.8 1,839,320 + PP_1645 0.44 +0.7 1,839,320 + PP_1645 0.44 +1.5 1,839,321 - PP_1645 0.44 +0.7 1,839,321 - PP_1645 0.44 -0.2 1,839,321 - PP_1645 0.44 -0.5 1,839,322 + PP_1645 0.44 -0.3 1,839,323 - PP_1645 0.45 +1.4 1,839,418 + PP_1645 0.71 -0.2 1,839,419 - PP_1645 0.72 +1.3 1,839,494 + -0.9 1,839,495 - +0.4 1,839,500 - -0.2 1,839,500 - +0.0 1,839,554 + -0.3 1,839,555 - +0.1 1,839,555 - +0.6 1,839,627 - +0.6 1,839,693 + PP_1646 0.19 -0.6 1,839,696 + PP_1646 0.20 +0.2 1,839,697 - PP_1646 0.20 +0.6 1,839,697 - PP_1646 0.20 +0.8 1,839,697 - PP_1646 0.20 +0.6 1,839,970 + PP_1646 0.79 +1.0 1,840,192 - PP_1647 0.20 +0.3 1,840,340 - PP_1647 0.55 +1.8 1,840,381 + PP_1647 0.64 +0.0 1,840,382 - PP_1647 0.64 -1.1 1,840,420 + PP_1647 0.73 +0.1 1,840,421 - PP_1647 0.73 +0.6 1,840,421 - PP_1647 0.73 +0.0 1,840,921 - +1.4 1,840,969 + -0.9 1,840,970 - -0.8 1,840,976 - +0.3
Or see this region's nucleotide sequence