Strain Fitness in Escherichia coli BW25113 around b4331

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
4,558,050	-				+0.9
4,558,104	-	yjiH	b4330	0.12	+1.6
4,558,116	+	yjiH	b4330	0.14	-0.4
4,558,181	-	yjiH	b4330	0.24	+0.1
4,558,185	+	yjiH	b4330	0.24	+0.7
4,558,211	-	yjiH	b4330	0.28	-3.1
4,558,301	+	yjiH	b4330	0.41	-1.0
4,558,328	+	yjiH	b4330	0.45	+0.1
4,558,392	+	yjiH	b4330	0.54	-3.9
4,558,392	+	yjiH	b4330	0.54	-0.5
4,558,428	+	yjiH	b4330	0.60	-0.2
4,558,741	-				-0.0
4,558,880	-				-1.9
4,559,040	+	yjiI	b4331	0.16	+1.7
4,559,040	+	yjiI	b4331	0.16	-0.5
4,559,045	-	yjiI	b4331	0.17	+0.9
4,559,050	+	yjiI	b4331	0.17	+0.3
4,559,050	+	yjiI	b4331	0.17	-3.8
4,559,082	+	yjiI	b4331	0.23	-0.5
4,559,082	+	yjiI	b4331	0.23	+1.6
4,559,113	+	yjiI	b4331	0.29	+0.9
4,559,141	-	yjiI	b4331	0.34	+5.9
4,559,183	-	yjiI	b4331	0.41	+2.2
4,559,196	+	yjiI	b4331	0.44	+0.3
4,559,204	-	yjiI	b4331	0.45	+0.3
4,559,204	-	yjiI	b4331	0.45	+0.8
4,559,204	-	yjiI	b4331	0.45	+0.6
4,559,286	-	yjiI	b4331	0.60	+1.6
4,559,286	-	yjiI	b4331	0.60	-0.3
4,559,338	-	yjiI	b4331	0.69	-4.4
4,559,340	-	yjiI	b4331	0.70	-0.1
4,559,361	-	yjiI	b4331	0.74	+1.1
4,559,482	-				-0.9
4,559,542	-				+0.2
4,559,557	+				-2.7
4,559,575	+				+1.4
4,559,575	+				-4.5
4,559,644	-	yjiJ	b4332	0.11	+0.8
4,559,649	-	yjiJ	b4332	0.11	-1.0
4,559,651	-	yjiJ	b4332	0.11	+0.6
4,559,690	-	yjiJ	b4332	0.14	+0.9
4,559,734	-	yjiJ	b4332	0.18	-3.5
4,559,734	-	yjiJ	b4332	0.18	-0.5
4,559,747	+	yjiJ	b4332	0.19	+0.2
4,559,788	-	yjiJ	b4332	0.23	-3.5
4,559,882	-	yjiJ	b4332	0.31	+0.9
4,559,927	+	yjiJ	b4332	0.35	-1.7
4,559,927	+	yjiJ	b4332	0.35	-0.7
4,559,978	-	yjiJ	b4332	0.39	+1.0
4,559,984	-	yjiJ	b4332	0.39	+0.4
4,560,037	+	yjiJ	b4332	0.44	-0.4
4,560,047	+	yjiJ	b4332	0.45	+0.8
4,560,047	-	yjiJ	b4332	0.45	-1.0
4,560,047	-	yjiJ	b4332	0.45	-1.0
4,560,068	-	yjiJ	b4332	0.46	+1.6
4,560,068	-	yjiJ	b4332	0.46	+0.8
4,560,148	+	yjiJ	b4332	0.53	+1.0
4,560,150	-	yjiJ	b4332	0.53	+1.0
4,560,220	+	yjiJ	b4332	0.59	-0.3
4,560,223	-	yjiJ	b4332	0.60	-2.8
4,560,294	-	yjiJ	b4332	0.66	+0.6
4,560,353	-	yjiJ	b4332	0.71	+0.9
4,560,355	+	yjiJ	b4332	0.71	-0.2
4,560,460	+	yjiJ	b4332	0.80	-0.8
4,560,499	+	yjiJ	b4332	0.83	+0.6
4,560,505	+	yjiJ	b4332	0.84	-1.5