Strain Fitness in Escherichia coli BW25113 around b2979

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
3,123,555	-				-0.1
3,123,555	-				+0.6
3,123,743	+	glcE	b4468	0.24	+0.7
3,123,761	-	glcE	b4468	0.26	+0.4
3,123,800	+	glcE	b4468	0.29	+1.3
3,123,800	+	glcE	b4468	0.29	-0.4
3,123,930	-	glcE	b4468	0.42	+0.3
3,123,930	-	glcE	b4468	0.42	+0.6
3,123,945	+	glcE	b4468	0.43	-0.4
3,124,288	-	glcE	b4468	0.76	-0.8
3,124,306	+	glcE	b4468	0.77	-0.4
3,124,558	+				+0.0
3,124,558	+				-1.8
3,124,586	+				+0.4
3,124,621	-				+1.2
3,124,800	+	glcD	b2979	0.17	-0.7
3,124,953	-	glcD	b2979	0.27	-1.7
3,125,135	+	glcD	b2979	0.39	+0.8
3,125,135	+	glcD	b2979	0.39	-1.1
3,125,139	+	glcD	b2979	0.40	-1.7
3,125,146	+	glcD	b2979	0.40	-1.3
3,125,243	-	glcD	b2979	0.47	-0.1
3,125,243	-	glcD	b2979	0.47	-3.1
3,125,263	+	glcD	b2979	0.48	+0.9
3,125,263	+	glcD	b2979	0.48	-3.9
3,125,297	-	glcD	b2979	0.50	-0.6
3,125,297	-	glcD	b2979	0.50	-0.9
3,125,518	-	glcD	b2979	0.65	-4.7
3,125,518	-	glcD	b2979	0.65	-0.5
3,125,608	+	glcD	b2979	0.71	+0.6
3,125,610	-	glcD	b2979	0.71	-0.4
3,125,663	+	glcD	b2979	0.75	+0.4
3,125,663	+	glcD	b2979	0.75	+1.3
3,125,707	-	glcD	b2979	0.78	-1.0
3,125,961	+				+0.3
3,125,962	+				-0.9
3,125,969	-				+1.1
3,125,979	-				+0.1
3,125,979	-				+1.4
3,125,983	-				+0.5
3,126,027	+				+0.1
3,126,066	-				-3.4
3,126,280	-				+0.8
3,126,282	-				+1.7
3,126,282	-				+0.5
3,126,345	-				-0.2
3,126,396	-	glcC	b2980	0.13	+1.0
3,126,427	+	glcC	b2980	0.17	+1.7
3,126,510	+	glcC	b2980	0.28	-0.5
3,126,598	+	glcC	b2980	0.40	-0.1
3,126,626	+	glcC	b2980	0.43	-0.4
3,126,740	-	glcC	b2980	0.58	+1.0
3,126,753	-	glcC	b2980	0.60	+0.2
3,126,865	-	glcC	b2980	0.75	+0.1
3,126,889	+	glcC	b2980	0.78	-0.4
3,126,926	-	glcC	b2980	0.83	-0.0