Strain Fitness in Escherichia coli BW25113 around b2759

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
2,879,182	+				+0.6
2,879,200	-	ygcJ	b2758	0.12	+0.1
2,879,232	+	ygcJ	b2758	0.15	+0.8
2,879,374	+	ygcJ	b2758	0.28	-0.8
2,879,381	+	ygcJ	b2758	0.28	-1.3
2,879,402	-	ygcJ	b2758	0.30	+0.6
2,879,402	-	ygcJ	b2758	0.30	-0.7
2,879,429	+	ygcJ	b2758	0.33	+1.9
2,879,439	-	ygcJ	b2758	0.34	-0.7
2,879,551	-	ygcJ	b2758	0.44	-4.5
2,879,594	-	ygcJ	b2758	0.48	-1.4
2,879,655	-	ygcJ	b2758	0.53	+0.3
2,879,655	-	ygcJ	b2758	0.53	-1.6
2,879,699	+	ygcJ	b2758	0.57	-2.0
2,879,699	+	ygcJ	b2758	0.57	+1.8
2,879,767	+	ygcJ	b2758	0.64	-2.6
2,879,767	+	ygcJ	b2758	0.64	-4.1
2,879,813	+	ygcJ	b2758	0.68	+0.3
2,879,813	-	ygcJ	b2758	0.68	-3.3
2,879,813	-	ygcJ	b2758	0.68	-0.1
2,880,101	-				-1.8
2,880,101	-				+1.2
2,880,109	-				-4.0
2,880,115	+				-1.2
2,880,116	-				+1.7
2,880,116	-				+1.8
2,880,124	-				+0.1
2,880,124	-				+2.1
2,880,135	-				+1.5
2,880,232	-	ygcK	b2759	0.11	+0.0
2,880,243	+	ygcK	b2759	0.14	-2.8
2,880,244	-	ygcK	b2759	0.14	+0.2
2,880,247	+	ygcK	b2759	0.14	+1.4
2,880,258	+	ygcK	b2759	0.17	+1.7
2,880,281	-	ygcK	b2759	0.22	+0.9
2,880,281	-	ygcK	b2759	0.22	+0.2
2,880,309	+	ygcK	b2759	0.27	+3.2
2,880,318	-	ygcK	b2759	0.29	-3.1
2,880,318	-				-0.5
2,880,387	-	ygcK	b2759	0.43	+0.7
2,880,387	-	ygcK	b2759	0.43	+1.1
2,880,404	-	ygcK	b2759	0.47	-0.8
2,880,404	-	ygcK	b2759	0.47	+2.2
2,880,407	-	ygcK	b2759	0.48	+0.3
2,880,407	-	ygcK	b2759	0.48	+0.7
2,880,409	+	ygcK	b2759	0.48	-1.3
2,880,409	+	ygcK	b2759	0.48	-1.7
2,880,410	-	ygcK	b2759	0.48	+0.9
2,880,456	-	ygcK	b2759	0.58	+1.8
2,880,463	-	ygcK	b2759	0.59	+0.1
2,880,480	+	ygcK	b2759	0.63	-1.3
2,880,480	+	ygcK	b2759	0.63	-1.7
2,880,509	-	ygcK	b2759	0.69	-2.8
2,880,509	-	ygcK	b2759	0.69	+1.3
2,880,535	-	ygcK	b2759	0.74	-0.2
2,880,535	-	ygcK	b2759	0.74	-1.0
2,880,541	-	ygcK	b2759	0.75	-0.3
2,880,558	-	ygcK	b2759	0.79	+0.3
2,880,588	-	ygcK	b2759	0.85	-0.0
2,880,595	+	ygcK	b2759	0.87	-0.5
2,880,595	+	ygcK	b2759	0.87	-1.3
2,880,627	+				+1.8
2,880,655	+				-1.9
2,880,655	+				-0.7
2,880,655	+				-3.1
2,880,655	+				-1.5
2,880,678	+				-0.2
2,880,678	+				-1.7
2,880,695	+				-0.7
2,880,695	+				-1.5
2,880,704	+				+2.5
2,880,720	+				+0.8
2,880,720	+				+1.8
2,880,758	-				-0.5
2,880,760	-				-0.5
2,880,769	-				+0.3
2,880,790	+				+1.8
2,880,790	-				+1.8
2,880,818	+	ygcL	b2760	0.11	+1.8
2,880,818	+	ygcL	b2760	0.11	-0.7
2,880,818	+	ygcL	b2760	0.11	-0.5
2,880,911	-	ygcL	b2760	0.17	+1.8
2,880,918	-	ygcL	b2760	0.18	+1.8
2,880,995	-	ygcL	b2760	0.23	+1.8
2,881,047	-	ygcL	b2760	0.26	+0.8
2,881,121	-	ygcL	b2760	0.31	+1.8
2,881,173	-	ygcL	b2760	0.35	+1.1
2,881,223	-	ygcL	b2760	0.38	-1.1
2,881,224	-	ygcL	b2760	0.38	+0.8
2,881,225	-	ygcL	b2760	0.38	+0.8
2,881,236	-	ygcL	b2760	0.39	-2.9
2,881,236	-	ygcL	b2760	0.39	+1.2
2,881,240	+	ygcL	b2760	0.39	-0.2
2,881,240	-	ygcL	b2760	0.39	+0.9
2,881,241	-	ygcL	b2760	0.39	+1.5
2,881,241	-	ygcL	b2760	0.39	-2.2
2,881,243	+	ygcL	b2760	0.39	+1.8
2,881,244	+	ygcL	b2760	0.39	+1.8
2,881,244	+	ygcL	b2760	0.39	+1.8
2,881,246	-	ygcL	b2760	0.39	-2.2
2,881,246	-	ygcL	b2760	0.39	+0.4
2,881,248	+	ygcL	b2760	0.39	+1.8
2,881,251	-	ygcL	b2760	0.40	+0.4
2,881,251	-	ygcL	b2760	0.40	-1.8
2,881,253	+	ygcL	b2760	0.40	+1.8
2,881,261	-	ygcL	b2760	0.40	-4.5
2,881,263	-	ygcL	b2760	0.40	+0.4
2,881,263	-	ygcL	b2760	0.40	-4.9
2,881,307	+	ygcL	b2760	0.43	+0.3
2,881,313	+	ygcL	b2760	0.44	+1.8
2,881,313	-	ygcL	b2760	0.44	+2.1
2,881,313	-	ygcL	b2760	0.44	+1.1
2,881,316	-	ygcL	b2760	0.44	-1.6
2,881,316	-	ygcL	b2760	0.44	+1.7
2,881,316	-	ygcL	b2760	0.44	-1.2
2,881,316	-	ygcL	b2760	0.44	+2.6
2,881,324	-	ygcL	b2760	0.45	+0.3
2,881,324	-	ygcL	b2760	0.45	-1.2
2,881,335	-	ygcL	b2760	0.45	-0.7
2,881,336	+	ygcL	b2760	0.45	-3.8
2,881,337	-	ygcL	b2760	0.45	+0.8
2,881,420	-	ygcL	b2760	0.51	+0.2
2,881,443	-	ygcL	b2760	0.52	-1.3
2,881,443	-	ygcL	b2760	0.52	+2.1
2,881,453	-	ygcL	b2760	0.53	-2.8
2,881,481	-	ygcL	b2760	0.55	+0.8
2,881,481	-	ygcL	b2760	0.55	+2.7
2,881,494	-	ygcL	b2760	0.56	-0.4
2,881,496	+	ygcL	b2760	0.56	+0.8
2,881,496	+	ygcL	b2760	0.56	-0.2
2,881,497	+	ygcL	b2760	0.56	-0.2
2,881,500	-	ygcL	b2760	0.56	+1.3
2,881,504	-	ygcL	b2760	0.56	-3.8
2,881,504	-	ygcL	b2760	0.56	+0.5
2,881,504	-	ygcL	b2760	0.56	+0.5
2,881,504	-	ygcL	b2760	0.56	-0.1
2,881,505	-	ygcL	b2760	0.57	+1.5
2,881,505	-	ygcL	b2760	0.57	-3.2
2,881,514	-	ygcL	b2760	0.57	-1.6
2,881,514	-	ygcL	b2760	0.57	-0.5
2,881,521	-	ygcL	b2760	0.58	-1.9
2,881,533	-	ygcL	b2760	0.58	+0.8
2,881,555	-	ygcL	b2760	0.60	-1.0
2,881,555	-	ygcL	b2760	0.60	+1.1
2,881,594	-	ygcL	b2760	0.62	+0.7
2,881,594	-	ygcL	b2760	0.62	+0.6
2,881,602	-	ygcL	b2760	0.63	-0.5
2,881,602	-	ygcL	b2760	0.63	-2.0