Strain Fitness in Escherichia coli BW25113 around b2140

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
2,226,528	+	mdtQ	b2139	0.82	-3.1
2,226,528	+	mdtQ	b2139	0.82	+0.7
2,226,668	-				-0.3
2,226,721	+				-0.0
2,226,738	+				-0.0
2,226,753	+				+0.2
2,226,753	+				+0.0
2,226,782	+				+1.1
2,226,782	+				+0.6
2,226,794	+				+0.0
2,226,903	+				+0.7
2,226,934	+				-0.6
2,226,934	+				+0.8
2,226,942	-				+1.9
2,227,010	+				+0.0
2,227,020	+	yohP	b4679	0.19	-2.2
2,227,020	+	yohP	b4679	0.19	-2.7
2,227,047	+	yohP	b4679	0.51	-1.4
2,227,047	+	yohP	b4679	0.51	-1.9
2,227,050	+	yohP	b4679	0.55	-1.5
2,227,051	+	yohP	b4679	0.56	+1.9
2,227,052	+	yohP	b4679	0.57	-2.1
2,227,052	+	yohP	b4679	0.57	-0.7
2,227,052	+	yohP	b4679	0.57	-3.1
2,227,126	+				+1.9
2,227,144	+				+1.9
2,227,158	-				+1.9
2,227,158	-				+1.9
2,227,163	-				-0.6
2,227,167	+				-1.2
2,227,168	-				-0.9
2,227,175	-				+0.9
2,227,179	-				+1.9
2,227,179	-				+0.9
2,227,336	+				-0.5
2,227,336	+				-0.6
2,227,345	+				-0.4
2,227,355	+				+1.9
2,227,395	+				+1.9
2,227,432	+				+1.9
2,227,592	-	dusC	b2140	0.14	-0.9
2,227,617	-	dusC	b2140	0.17	+0.2
2,227,620	-	dusC	b2140	0.17	-1.2
2,227,620	-	dusC	b2140	0.17	-1.1
2,227,663	+	dusC	b2140	0.21	+1.9
2,227,663	+	dusC	b2140	0.21	+1.9
2,227,671	-	dusC	b2140	0.22	+0.4
2,227,671	-	dusC	b2140	0.22	-0.6
2,227,671	-	dusC	b2140	0.22	-1.1
2,227,671	-	dusC	b2140	0.22	-1.6
2,227,671	-	dusC	b2140	0.22	+0.1
2,227,674	+	dusC	b2140	0.23	+0.9
2,227,675	-	dusC	b2140	0.23	+0.1
2,227,676	-	dusC	b2140	0.23	+0.2
2,227,747	-	dusC	b2140	0.30	+0.5
2,227,752	-	dusC	b2140	0.31	+0.3
2,227,752	-	dusC	b2140	0.31	-3.0
2,227,767	+	dusC	b2140	0.32	-1.2
2,227,767	+	dusC	b2140	0.32	-0.4
2,227,791	-	dusC	b2140	0.35	-0.7
2,227,791	-	dusC	b2140	0.35	+0.2
2,227,791	-	dusC	b2140	0.35	-3.4
2,227,808	-	dusC	b2140	0.37	-1.2
2,227,808	-	dusC	b2140	0.37	-1.1
2,227,862	+	dusC	b2140	0.42	-2.2
2,227,862	+	dusC	b2140	0.42	-3.6
2,227,891	-	dusC	b2140	0.45	-0.7
2,227,918	-	dusC	b2140	0.48	-0.6
2,228,138	+	dusC	b2140	0.72	+0.0
2,228,327	-				-0.5
2,228,444	-				+2.5
2,228,444	-				+0.7
2,228,446	-				-1.8
2,228,446	-				-0.1
2,228,530	-				-4.3
2,228,542	-				+0.4
2,228,542	-				+0.6
2,228,637	-				+0.3
2,228,637	-				-3.9
2,228,716	-	yohJ	b2141	0.18	-4.0
2,228,716	-	yohJ	b2141	0.18	+0.4
2,228,753	+	yohJ	b2141	0.27	-3.5
2,228,753	+	yohJ	b2141	0.27	-3.9
2,228,951	+	yohJ	b2141	0.76	+0.5
2,229,015	+				+0.9
2,229,068	-				+1.3
2,229,123	-	yohK	b2142	0.12	-3.6
2,229,123	-	yohK	b2142	0.12	-2.3
2,229,123	-	yohK	b2142	0.12	+1.0
2,229,123	-	yohK	b2142	0.12	+0.3
2,229,190	+	yohK	b2142	0.21	+0.2
2,229,221	+	yohK	b2142	0.26	+0.9
2,229,221	+	yohK	b2142	0.26	-0.1
2,229,259	+	yohK	b2142	0.31	-1.6
2,229,272	-	yohK	b2142	0.33	-0.4
2,229,279	+	yohK	b2142	0.34	-1.1
2,229,279	+	yohK	b2142	0.34	+2.0
2,229,284	+	yohK	b2142	0.35	+0.1
2,229,284	+	yohK	b2142	0.35	-0.6
2,229,292	-	yohK	b2142	0.36	-3.6