Strain Fitness in Escherichia coli BW25113 around b1963

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
2,030,164	+	dcm	b1961	0.87	+0.8
2,030,226	+				+1.2
2,030,226	+				-1.0
2,030,231	+				+1.3
2,030,451	+				-2.4
2,030,564	+	yedJ	b1962	0.22	+1.0
2,030,595	+	yedJ	b1962	0.27	+0.9
2,030,690	+	yedJ	b1962	0.41	+0.3
2,030,849	+	yedJ	b1962	0.63	+0.6
2,031,000	+	yedJ	b1962	0.85	+0.3
2,031,033	-	yedJ	b1962	0.90	-0.4
2,031,117	+				+0.1
2,031,157	+				-3.8
2,031,157	+				-0.9
2,031,174	+				-0.5
2,031,179	+				-3.4
2,031,179	+				+1.4
2,031,181	-	b1963	b1963	0.10	-0.0
2,031,181	-	b1963	b1963	0.10	+1.5
2,031,226	+	b1963	b1963	0.23	+0.7
2,031,226	+	b1963	b1963	0.23	+1.8
2,031,244	+	b1963	b1963	0.28	+1.5
2,031,369	-	b1963	b1963	0.62	-0.9
2,031,378	+	b1963	b1963	0.64	-0.4
2,031,473	+				-0.3
2,031,507	+				-3.7
2,031,521	+				-0.2
2,031,522	+				-0.1
2,031,527	-				-0.1
2,031,527	-				-0.1
2,031,529	-				-0.3
2,031,697	+	rseX	b4603	0.26	-2.8
2,031,776	-				+0.1
2,031,995	-				+1.9
2,031,995	-				-0.4
2,032,073	-				-0.6
2,032,173	-				-0.7
2,032,173	-				-2.8
2,032,181	+				-0.6
2,032,191	-				+1.9
2,032,191	-				+1.9
2,032,197	+	yedS	b4496	0.10	+1.0
2,032,197	+	yedS	b4496	0.10	+0.1
2,032,200	+	yedS	b4496	0.10	-0.4
2,032,200	+	yedS	b4496	0.10	-1.0
2,032,200	+	yedS	b4496	0.10	+2.2
2,032,203	-	yedS	b4496	0.11	+1.9
2,032,203	-	yedS	b4496	0.11	-0.4
2,032,205	+	yedS	b4496	0.11	-0.4
2,032,205	+	yedS	b4496	0.11	-1.4
2,032,205	+	yedS	b4496	0.11	+0.3
2,032,205	-	yedS	b4496	0.11	-1.2
2,032,231	+	yedS	b4496	0.13	+0.2
2,032,231	+	yedS	b4496	0.13	-0.3
2,032,236	+	yedS	b4496	0.13	+2.0
2,032,236	-	yedS	b4496	0.13	-3.4
2,032,238	+	yedS	b4496	0.14	+0.6
2,032,238	+	yedS	b4496	0.14	-1.0
2,032,252	-	yedS	b4496	0.15	-1.3
2,032,252	-	yedS	b4496	0.15	-0.7
2,032,266	+	yedS	b4496	0.16	-0.7
2,032,274	+	yedS	b4496	0.17	-0.2
2,032,274	-	yedS	b4496	0.17	-0.4
2,032,274	-	yedS	b4496	0.17	-0.1
2,032,299	-	yedS	b4496	0.19	-0.0
2,032,299	-	yedS	b4496	0.19	+2.0
2,032,352	-	yedS	b4496	0.23	+1.0
2,032,387	+	yedS	b4496	0.26	+0.0
2,032,411	+	yedS	b4496	0.28	+0.8
2,032,426	+	yedS	b4496	0.29	-0.3
2,032,432	-	yedS	b4496	0.30	-0.4
2,032,436	+	yedS	b4496	0.30	-0.1
2,032,444	-	yedS	b4496	0.31	-1.8