Strain Fitness in Escherichia coli BW25113 around b1523
Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB |
---|---|---|---|---|---|
remove | |||||
1,608,994 | + | -3.0 | |||
1,609,041 | - | yneF | b1522 | 0.12 | +0.5 |
1,609,234 | - | yneF | b1522 | 0.32 | -0.4 |
1,609,408 | - | yneF | b1522 | 0.50 | +1.1 |
1,609,728 | - | yneF | b1522 | 0.84 | -0.7 |
1,609,730 | - | yneF | b1522 | 0.84 | +0.0 |
1,609,859 | - | -1.9 | |||
1,609,946 | + | -0.2 | |||
1,610,016 | + | -1.1 | |||
1,610,047 | - | yneG | b1523 | 0.16 | -0.1 |
1,610,249 | + | yneG | b1523 | 0.72 | -3.3 |
1,610,422 | - | -0.4 | |||
1,610,543 | + | yneH | b1524 | 0.21 | -4.0 |
1,611,288 | + | -3.6 |
Or see this region's nucleotide sequence